RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 RASGRP1O95267 797 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 AGTP01019 485 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 IFNB1P01574 187 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 ATP1A1P05023 1023 aaKnown RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 ADRA1AP35348 466 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 HK3P52790 923 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 SRP54P61011 504 aaKnown RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 SIM1P81133 766 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 CDK3Q00526 305 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 ALG11Q2TAA5 492 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 ADAMTSL4Q6UY14 1074 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 RANBP10Q6VN20 620 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 GLRX5Q86SX6 157 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 HID1Q8IV36 788 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 SLC25A45Q8N413 288 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 RASGEF1CQ8N431 466 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 OR56A4Q8NGH8 313 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 EID2BQ96D98 161 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 UCKL1Q9NWZ5 548 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 FTSJ1Q9UET6 329 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 APOBEC3BQ9UH17 382 aaKnown RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 FEZ2Q9UHY8 353 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 DRG1Q9Y295 367 aaKnown RBP12.48□□□□□ -0.41
CCNC-216ENST00000523961 SPO11Q9Y5K1 396 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 CSNK1G3Q9Y6M4 447 aa12.48□□□□□ -0.41
CCNC-216ENST00000523961 SPAARA0A1B0GVQ0 90 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 TMEM202A6NGA9 273 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 SCAMP1O15126 338 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 AQP9O43315 295 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 TNFSF14O43557 240 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 METTL18O95568 372 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 LDOC1O95751 146 aaPredicted RBP12.47□□□□□ -0.41
CCNC-216ENST00000523961 SOD1P00441 154 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 TNFP01375 233 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 SLC4A1P02730 911 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 ALPPL2P10696 532 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 CTSEP14091 401 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 HMGCLP35914 325 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 FDFT1P37268 417 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 DCDC1P59894 354 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 GNG11P61952 73 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 PRRT3Q5FWE3 981 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 HENMT1Q5T8I9 393 aaKnown RBP12.47□□□□□ -0.41
CCNC-216ENST00000523961 KCTD11Q693B1 232 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 RD3Q7Z3Z2 195 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 GLT6D1Q7Z4J2 308 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
CCNC-216ENST00000523961 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 OR4C6Q8NH72 309 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 BLOC1S5Q8TDH9 187 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 TSACCQ96A04 125 aaPredicted RBP12.47□□□□□ -0.41
CCNC-216ENST00000523961 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 WDR24Q96S15 920 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 OSBPL9Q96SU4 736 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 TBL1YQ9BQ87 522 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 DUSP23Q9BVJ7 150 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 LGR4Q9BXB1 951 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 LRRC40Q9H9A6 602 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 PNMA8BQ9ULN7 279 aaPredicted RBP12.47□□□□□ -0.41
CCNC-216ENST00000523961 SNX12Q9UMY4 172 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCNC-216ENST00000523961 DGKBQ9Y6T7 804 aa12.47□□□□□ -0.41
CCNC-216ENST00000523961 SPTBN2O15020 2390 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 PGRMC1O00264 195 aaKnown RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 CES2O00748 559 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 TPP1O14773 563 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 AURKAO14965 403 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 FFAR2O15552 330 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 TCP1P17987 556 aaKnown RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 ELOCQ15369 112 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 ZDHHC20Q5W0Z9 365 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 C4orf22Q6V702 233 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 TTC30BQ8N4P2 665 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 PRELID2Q8N945 189 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 GPR26Q8NDV2 337 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 PDXPQ96GD0 296 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 HIC2Q96JB3 615 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 CNDP2Q96KP4 475 aaKnown RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 AGAP2Q99490 1192 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 APOL2Q9BQE5 337 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 ZSCAN5AQ9BUG6 496 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 LRRC61Q9BV99 259 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 SPATA16Q9BXB7 569 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms