RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 KRT81Q14533 505 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 TCEA2Q15560 299 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 PYCR3Q53H96 274 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 ZNF574Q6ZN55 896 aaPredicted RBP12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 NAGSQ8N159 534 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 ARRDC2Q8TBH0 407 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 COX14Q96I36 57 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 ZNF670Q9BS34 389 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 NT5MQ9NPB1 228 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 HAUS2Q9NVX0 235 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 UVRAGQ9P2Y5 699 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 MOSPD1Q9UJG1 213 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 PCDHGA3Q9Y5H0 932 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
TOP1MT-217ENST00000523417 ZNF462Q96JM2 2506 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 LRP4O75096 1905 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 B4DGG1 531 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 B8ZZF3 427 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 PPM1DO15297 605 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 PROSCO94903 275 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 ECEL1O95672 775 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 ITGB2P05107 769 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 CD48P09326 243 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 HGFP14210 728 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 MX2P20592 715 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 GPR1P46091 355 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 STC1P52823 247 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 LIMK2P53671 638 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 OR1D5P58170 312 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 PTPRRQ15256 657 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 ATP13A4Q4VNC1 1196 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 LRRC66Q68CR7 880 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 RAET1GQ6H3X3 334 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 OR4D9Q8NGE8 314 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 EXD1Q8NHP7 514 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 AP2M1Q96CW1 435 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 BTBD6Q96KE9 485 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 TDRD1Q9BXT4 1180 aaKnown RBP12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 SYNDIG1Q9H7V2 258 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 RBM22Q9NW64 420 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 VPS18Q9P253 973 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 PISDQ9UG56 409 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 KIF26BQ2KJY2 2108 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 COL6A6A6NMZ7 2263 aa12.59□□□□□ -0.39
TOP1MT-217ENST00000523417 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 C9orf172C9J069 976 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 KRT7P08729 469 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 ALDH4A1P30038 563 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 ETV5P41161 510 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 GNPDA1P46926 289 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 FASLGP48023 281 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 POLD2P49005 469 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 MAZP56270 477 aaKnown RBP12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 ASTE1Q2TB18 679 aaPredicted RBP12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 TMEM164Q5U3C3 297 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 DENND2CQ68D51 928 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 USP7Q93009 1102 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 SCAMP4Q969E2 229 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 SEMA4CQ9C0C4 833 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 CDH19Q9H159 772 aa12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 AKAP7Q9P0M2 348 aaPredicted RBP12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 CNOT6Q9ULM6 557 aaKnown RBP12.58□□□□□ -0.4
TOP1MT-217ENST00000523417 IGHV1OR21-1A0A087WYE8 117 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 PRAMEF33A0A0G2JMD5 474 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 IGHV5-10-1A0A0J9YXX1 117 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 PRAMEF10O60809 474 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 DNAJC6O75061 913 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 GYPCP04921 128 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 H2AFZP0C0S5 128 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 CTPS1P17812 591 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 ITIH1P19827 911 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 CA4P22748 312 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 MAN1A1P33908 653 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 GPLD1P80108 840 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 ITKQ08881 620 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 NIPAL4Q0D2K0 466 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 SLC10A2Q12908 348 aaPredicted RBP12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 LY6DQ14210 128 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 C16orf72Q14CZ0 275 aa12.57□□□□□ -0.4
TOP1MT-217ENST00000523417 TGIF1Q15583 401 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms