RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CYP4B1P13584 511 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 OXTRP30559 389 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 CCT8P50990 548 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 MBTD1Q05BQ5 628 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 TUBA3CQ13748 450 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 MEP1AQ16819 746 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 FKBP9P1Q75LS8 142 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 P2RY8Q86VZ1 359 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 PROSER1Q86XN7 944 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 OR8H2Q8N162 312 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SVOPQ8N4V2 548 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SETD9Q8NE22 299 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 STARD8Q92502 1023 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SNX19Q92543 992 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 ELMO1Q92556 727 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 PROX1Q92786 737 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 TMBIM1Q969X1 311 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 PPP1R2P1Q96PQ5 205 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 DEPDC7Q96QD5 511 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 LHPPQ9H008 270 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 PDZD7Q9H5P4 517 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 EXOSC4Q9NPD3 245 aaKnown RBP9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SLC2A6Q9UGQ3 507 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 MAGEL2Q9UJ55 1249 aa9.02□□□□□ -0.97
CSMD1-212ENST00000523387 SHANK3Q9BYB0 1731 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 LOC100506127A0A0U1RQW1 187 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 H0Y858 1186 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 VPS4BO75351 444 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SIX3O95343 332 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 MED26O95402 600 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ZNF682O95780 498 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 UGT2B4P06133 528 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 MATN1P21941 496 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 RFC2P35250 354 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 HPCAL1P37235 193 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 NDUFV1P49821 464 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ILF2Q12905 390 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 PRKG2Q13237 762 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 KRR1Q13601 381 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SKIV2LQ15477 1246 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 USP41Q3LFD5 358 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SLC36A3Q495N2 470 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 BTBD8Q5XKL5 378 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SLC2A7Q6PXP3 512 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 CYP4V2Q6ZWL3 525 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 MINDY2Q8NBR6 621 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ZNF540Q8NDQ6 660 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ULK4Q96C45 1275 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 GJD4Q96KN9 370 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TEKT5Q96M29 485 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 FUNDC2Q9BWH2 189 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 DUS2Q9NX74 493 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TMEM181Q9P2C4 612 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 PPEF2O14830 753 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 GLP2RO95838 553 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ANGPTL1O95841 491 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 FTH1P02794 183 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 NPR3P17342 541 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 AKT1P31749 480 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 POLD2P49005 469 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 NKX2-5P52952 324 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ARSFP54793 590 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 INCA1Q0VD86 236 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ATP6AP1Q15904 470 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TWF2Q6IBS0 349 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ADHFE1Q8IWW8 467 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 LSMEM2Q8N112 164 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ATG16L2Q8NAA4 619 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 MAF1Q9H063 256 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 MUC13Q9H3R2 512 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 NUDT5Q9UKK9 219 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SATB2Q9UPW6 733 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 FAM50BQ9Y247 325 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SLC27A5Q9Y2P5 690 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 TCAF1Q9Y4C2 921 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 CPQQ9Y646 472 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 LAMB2P55268 1798 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ASB14A6NK59 587 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 A8MU76 341 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ZNF99A8MXY4 864 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 IL12AP29459 219 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 CHRNA4P43681 627 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ARPC4P59998 168 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SIM2Q14190 667 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 DMC1Q14565 340 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ACAP2Q15057 778 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 RBM48Q5RL73 367 aaKnown RBP9.01□□□□□ -0.97
CSMD1-212ENST00000523387 SYPL2Q5VXT5 272 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 GALNT5Q7Z7M9 940 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 CLEC14AQ86T13 490 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 HORMAD1Q86X24 394 aa9.01□□□□□ -0.97
CSMD1-212ENST00000523387 DCBLD1Q8N8Z6 715 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms