RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NAGSQ8N159 534 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 BBS5Q8N3I7 341 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 NSMCE1Q8WV22 266 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 HTR3CQ8WXA8 447 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 SEMA3CQ99985 751 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 ABCG8Q9H221 673 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 AIPL1Q9NZN9 384 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 ACSL6Q9UKU0 697 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 PCDHB11Q9Y5F2 797 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 ZNF106Q9H2Y7 1883 aaKnown RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 MFSD11O43934 449 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 ASMTLO95671 621 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 SOD1P00441 154 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 FGF3P11487 239 aaPredicted RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 CD1CP29017 333 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 CSF2RBP32927 897 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 PCK1P35558 622 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 HSPA9P38646 679 aaKnown RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 PRKCIP41743 596 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 ARSDP51689 593 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 CDH6P55285 790 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 DSC2Q02487 901 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 IHHQ14623 411 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 TBR1Q16650 682 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 USP45Q70EL2 814 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 ART4Q93070 314 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 AP2M1Q96CW1 435 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 OR2M4Q96R27 311 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 THAP2Q9H0W7 228 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 TRNAU1APQ9NX07 287 aaKnown RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 AKAP7Q9P0M2 348 aaPredicted RBP15.37■□□□□ 0.05
MRPS28-209ENST00000522987 ANAPC7Q9UJX3 599 aa15.37■□□□□ 0.05
MRPS28-209ENST00000522987 A8MU76 341 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 EML2O95834 649 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 EPHB1P54762 984 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 BOLA3Q53S33 107 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 ZNF438Q7Z4V0 828 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 TECPR1Q7Z6L1 1165 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 C17orf82Q86X59 251 aaPredicted RBP15.36■□□□□ 0.05
MRPS28-209ENST00000522987 FAM129CQ86XR2 697 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 CBARPQ8N350 705 aaPredicted RBP15.36■□□□□ 0.05
MRPS28-209ENST00000522987 PIH1D2Q8WWB5 315 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 TMEM159Q96B96 161 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 TRIM11Q96F44 468 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 SCRN2Q96FV2 425 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 NUP85Q9BW27 656 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 NAT10Q9H0A0 1025 aaKnown RBP15.36■□□□□ 0.05
MRPS28-209ENST00000522987 ISCUQ9H1K1 167 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 CLMPQ9H6B4 373 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 KCNK4Q9NYG8 393 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 CHKBQ9Y259 395 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 SLC17A4Q9Y2C5 497 aa15.36■□□□□ 0.05
MRPS28-209ENST00000522987 PCYT1BQ9Y5K3 369 aaPredicted RBP15.36■□□□□ 0.05
MRPS28-209ENST00000522987 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 IGHV1OR21-1A0A087WYE8 117 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 SERPINC1P01008 464 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
MRPS28-209ENST00000522987 IVLP07476 585 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 MAPK9P45984 424 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
MRPS28-209ENST00000522987 SLC25A11Q02978 314 aaKnown RBP15.35■□□□□ 0.05
MRPS28-209ENST00000522987 KCNC4Q03721 635 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 CLCA4Q14CN2 919 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 TMEM164Q5U3C3 297 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 DTX1Q86Y01 620 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 NRSN1Q8IZ57 195 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 ZSCAN1Q8NBB4 408 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 MCCC1Q96RQ3 725 aaPredicted RBP15.35■□□□□ 0.05
MRPS28-209ENST00000522987 RIOK2Q9BVS4 552 aaKnown RBP15.35■□□□□ 0.05
MRPS28-209ENST00000522987 CDH19Q9H159 772 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 OCIAD1Q9NX40 245 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 B3GALT1Q9Y5Z6 326 aa15.35■□□□□ 0.05
MRPS28-209ENST00000522987 A0A1B0GTH6 734 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 A0A1W2PQ67 120 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 A0A1W2PQC6 194 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 EFCAB7A8K855 629 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 SMTNL1A8MU46 457 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 WISP1O95388 367 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 CLDN7O95471 211 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 MBD3O95983 291 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 MYBL1P10243 752 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 NFKBIAP25963 317 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 SERPINB6P35237 376 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 LIMK2P53671 638 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 PTSQ03393 145 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 PIGHQ14442 188 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-209ENST00000522987 CHST15Q7LFX5 561 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-209ENST00000522987 IL22RA1Q8N6P7 574 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 LPCAT1Q8NF37 534 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 SLC37A2Q8TED4 501 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 CTRCQ99895 268 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 ARFGAP3Q9NP61 516 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 SLC39A1Q9NY26 324 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 ZNHIT2Q9UHR6 403 aa15.34■□□□□ 0.05
MRPS28-209ENST00000522987 OAS3Q9Y6K5 1087 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms