RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ILF3Q12906 894 aaKnown RBP eCLIP20.63■□□□□ 0.89
SDCBP-209ENST00000522243 SLC30A9Q6PML9 568 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 IGF2-ASQ6U949 168 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-209ENST00000522243 ZDHHC1Q8WTX9 485 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 CEP41Q9BYV8 373 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 HAUS2Q9NVX0 235 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 PLEKHM1Q9Y4G2 1056 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 HYOU1Q9Y4L1 999 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 ST14Q9Y5Y6 855 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 CAPN8A6NHC0 703 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 C3orf70A6NLC5 250 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 INPP4BO15327 924 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 KRT1P04264 644 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 FGF1P05230 155 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 TEAD1P28347 426 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 CD86P42081 329 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 STC1P52823 247 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 PPIDQ08752 370 aaKnown RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 ZBTB17Q13105 803 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 NPNTQ6UXI9 565 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 B4GALNT4Q76KP1 1039 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 MARK2Q7KZI7 788 aaKnown RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 RAB11FIP2Q7L804 512 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 SPRED1Q7Z699 444 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 RHOT2Q8IXI1 618 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 FBXO39Q8N4B4 442 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 ARL14Q8N4G2 192 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 CNTD1Q8N815 330 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 KIAA1524Q8TCG1 905 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 RNF25Q96BH1 459 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 LIN37Q96GY3 246 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 RIOK2Q9BVS4 552 aaKnown RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 MAK16Q9BXY0 300 aaKnown RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 TRNAU1APQ9NX07 287 aaKnown RBP20.62■□□□□ 0.89
SDCBP-209ENST00000522243 TAAR2Q9P1P5 351 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 APPL1Q9UKG1 709 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 SLC17A4Q9Y2C5 497 aa20.62■□□□□ 0.89
SDCBP-209ENST00000522243 UNC13CQ8NB66 2214 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 LAMA5O15230 3695 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 CDRT15L2A8MXV6 281 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 APOL1O14791 398 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 IVLP07476 585 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 MMP2P08253 660 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 HGFP14210 728 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 CA4P22748 312 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 ADCY8P40145 1251 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 ARHGAP25P42331 645 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 CTBSQ01459 385 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 AP1B1Q10567 949 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 BROXQ5VW32 411 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 GPR155Q7Z3F1 870 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 RFX6Q8HWS3 928 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 PATE1Q8WXA2 126 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 TMEM74Q96NL1 305 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 UBL7Q96S82 380 aaPredicted RBP20.61■□□□□ 0.89
SDCBP-209ENST00000522243 STRADBQ9C0K7 418 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 CPNE5Q9HCH3 593 aa20.61■□□□□ 0.89
SDCBP-209ENST00000522243 C1orf232A0A0U1RR37 186 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 EIF4E1BA6NMX2 242 aaKnown RBP20.6■□□□□ 0.89
SDCBP-209ENST00000522243 AKR1B15C9JRZ8 316 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-209ENST00000522243 PLD2O14939 933 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 NUDT21O43809 227 aaKnown RBP20.6■□□□□ 0.89
SDCBP-209ENST00000522243 MTA2O94776 668 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 ECEL1O95672 775 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 PNLIPP16233 465 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 DYNLT1P63172 113 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 SKOR1P84550 965 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 QPCTQ16769 361 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 SLC9A4Q6AI14 798 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 ADAMTSL4Q6UY14 1074 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 OR2M4Q96R27 311 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 SEPT10Q9P0V9 454 aa20.6■□□□□ 0.89
SDCBP-209ENST00000522243 TMX2-CTNND1H3BSU7 103 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 B4GAT1O43505 415 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ASMTLO95671 621 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ALDH4A1P30038 563 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 CCKBRP32239 447 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 UGT1A5P35504 534 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ACTR1BP42025 376 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 OR1D5P58170 312 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ACTR1AP61163 376 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 RPL26P61254 145 aaKnown RBP20.59■□□□□ 0.89
SDCBP-209ENST00000522243 IFI35P80217 286 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-209ENST00000522243 B4GALNT1Q00973 533 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 GALNT3Q14435 633 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 LLGL1Q15334 1064 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 AMZ1Q400G9 498 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ODF2Q5BJF6 829 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 ZNF765Q7L2R6 523 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 TMPRSS9Q7Z410 1059 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 KDELC2Q7Z4H8 507 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 JAMLQ86YT9 394 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 CNGA4Q8IV77 575 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 NRSN1Q8IZ57 195 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 NAGSQ8N159 534 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 WDR24Q96S15 920 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 MLPHQ9BV36 600 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-209ENST00000522243 RDH14Q9HBH5 336 aa20.59■□□□□ 0.89
SDCBP-209ENST00000522243 WDR70Q9NW82 654 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms