RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CAP1Q01518 475 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 MFSD5Q6N075 450 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 C16orf46Q6P387 395 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 OR6K2Q8NGY2 324 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 ITFG1Q8TB96 612 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 POLR1BQ9H9Y6 1135 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 PCDHB1Q9Y5F3 818 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 RGSL1A5PLK6 1076 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 C2CD4BA6NLJ0 364 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 RECQL5O94762 991 aaPredicted RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 IL6P05231 212 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 LDLRAD1Q5T700 205 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 ZDHHC4Q9NPG8 344 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 KCTD5Q9NXV2 234 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 ASF1AQ9Y294 204 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 A0A1W2PQ45 241 aaPredicted RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 A0A1W2PQY0 241 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 PAPSS1O43252 624 aaPredicted RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 MFSD11O43934 449 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 RAB25P57735 213 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 SOWAHAQ2M3V2 549 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 KRT74Q7RTS7 529 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 SLC25A51Q9H1U9 297 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 ULK1O75385 1050 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 KCNE1P15382 129 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 SLC16A1P53985 500 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 GBE1Q04446 702 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ARMCX6Q7L4S7 300 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ROGDIQ9GZN7 287 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 CCNB1IP1Q9NPC3 277 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 CNTN3Q9P232 1028 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 EVLQ9UI08 416 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 C3orf18Q9UK00 162 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 TMA7Q9Y2S6 64 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 RPP40O75818 363 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 ASPAP45381 313 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ZFP28Q8NHY6 868 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ASZ1Q8WWH4 475 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 USP7Q93009 1102 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ARHGEF4Q9NR80 690 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 TNFRSF21O75509 655 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 CYP7B1O75881 506 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 SCNN1AP37088 669 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 CCNHP51946 323 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 CDCA2Q69YH5 1023 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 SAPCD2Q86UD0 394 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 FAM124AQ86V42 546 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 CRYBG2Q8N1P7 616 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 RASGEF1CQ8N431 466 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 POC5Q8NA72 575 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 FAM13CQ8NE31 585 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 WFIKKN2Q8TEU8 576 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ING5Q8WYH8 240 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 PPP3R2Q96LZ3 170 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 RHOJQ9H4E5 214 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 NOCTQ9UK39 431 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 C10orf71Q711Q0 1435 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 OTCP00480 354 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 GTF2E2P29084 291 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 CDKN2BP42772 138 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 DGKGP49619 791 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 RPS6KA3P51812 740 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 NEK3P51956 506 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 HNRNPDQ14103 355 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 SQLEQ14534 574 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 INO80DQ53TQ3 878 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 ZNF57Q68EA5 555 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 WDR48Q8TAF3 677 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 TCF12Q99081 682 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 ACE2Q9BYF1 805 aaPredicted RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 RAB26Q9ULW5 256 aa16.17■□□□□ 0.18
USP42-207ENST00000521713 REXO2Q9Y3B8 237 aaKnown RBP16.17■□□□□ 0.18
USP42-207ENST00000521713 ISM1B1AKI9 464 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 MATN3O15232 486 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 PABPC1P11940 636 aaKnown RBP16.16■□□□□ 0.18
USP42-207ENST00000521713 LRPAP1P30533 357 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 NRF1Q16656 503 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 RFX4Q33E94 735 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 ZCCHC23Q6ZST2 131 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 ZNF605Q86T29 641 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 COX4I2Q96KJ9 171 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 FBXW11Q9UKB1 542 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 ZFP37Q9Y6Q3 630 aaPredicted RBP16.16■□□□□ 0.18
USP42-207ENST00000521713 GLYATL1P3A0A0U1RQE8 302 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 DNM1LO00429 736 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 RNASEH2AO75792 299 aaKnown RBP16.16■□□□□ 0.18
USP42-207ENST00000521713 STAT5AP42229 794 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 IL10RBQ08334 325 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 CTBP1Q13363 440 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 CYP2R1Q6VVX0 501 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 GALNT15Q8N3T1 639 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 FIG4Q92562 907 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 SPAG4Q9NPE6 437 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 PTTG2Q9NZH5 202 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 PSMD13Q9UNM6 376 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms