RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RBAKQ9NYW8 714 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 STIM2Q9P246 746 aa7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 CTTNBP2NLQ9P2B4 639 aa7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 IPO11Q9UI26 975 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 ADAM21Q9UKJ8 722 aa7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 TMEM184BQ9Y519 407 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 ALG6Q9Y672 507 aa7.35□□□□□ -1.23
CTNNA1-227ENST00000521387 GOLGA6L7A0A1B0GV03 622 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 B4E171 279 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 AGPSO00116 658 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 PGRMC1O00264 195 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 E2F3O00716 465 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 TBL1XO60907 577 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CTSLP07711 333 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM153BP0C7A2 387 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CCDC130P13994 396 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 PNLIPP16233 465 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 GLB1P16278 677 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 COMTP21964 271 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CSTF2P33240 577 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 TSPAN7P41732 249 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 PIK3CAP42336 1068 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 NUMBP49757 651 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 GCNT1Q02742 428 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 GUCY2DQ02846 1103 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 BIRC3Q13489 604 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ELOAQ14241 798 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM153CQ494X1 144 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 PITRM1Q5JRX3 1037 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 DCAF12Q5T6F0 453 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 PIK3R6Q5UE93 754 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 C11orf63Q6NUN7 778 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 AADACL2Q6P093 401 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 RFWD3Q6PCD5 774 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ENOSF1Q7L5Y1 443 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 IFT20Q8IY31 132 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 APCDD1Q8J025 514 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 NXPE1Q8N323 547 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ST6GALNAC3Q8NDV1 305 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 IFT81Q8WYA0 676 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ALG3Q92685 438 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 KRT35Q92764 455 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 INPP5DQ92835 1189 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CAVIN3Q969G5 261 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ZNF653Q96CK0 615 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 RNF31Q96EP0 1072 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CTRCQ99895 268 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 MED10Q9BTT4 135 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ASPSCR1Q9BZE9 553 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 DDX47Q9H0S4 455 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 MCCC2Q9HCC0 563 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CHST11Q9NPF2 352 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 SEMA3GQ9NS98 782 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 CLIC5Q9NZA1 410 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 AKAP7Q9P0M2 348 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 MARCH2Q9P0N8 246 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM153AQ9UHL3 310 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 TTC7AQ9ULT0 858 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 GPR34Q9UPC5 381 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 RPS6KL1Q9Y6S9 549 aa7.34□□□□□ -1.23
CTNNA1-227ENST00000521387 ESYT3A0FGR9 886 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CCDC188H7C350 402 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KRIT1O00522 736 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KCNN4O15554 427 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 SART1O43290 800 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PHACTR2O75167 634 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CEACAM4O75871 244 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 STK17BO94768 372 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CPNE6O95741 557 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 UNGP13051 313 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 MPSTP25325 297 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KIR3DL1P43629 444 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 GCGRP47871 477 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 MARCKSL1P49006 195 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PEX5P50542 639 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CCL11P51671 97 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 LIMK2P53671 638 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 IST1P53990 364 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 OR1D5P58170 312 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 ECT2LQ008S8 904 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 TLE4Q04727 773 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 FOXM1Q08050 763 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 GPS2Q13227 327 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 NNTQ13423 1086 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CUL2Q13617 745 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KCTD19Q17RG1 926 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 MPP7Q5T2T1 576 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 NAA35Q5VZE5 725 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KCTD16Q68DU8 428 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 DUS1LQ6P1R4 473 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 OGFOD3Q6PK18 319 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 LVRNQ6Q4G3 990 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 KDELC2Q7Z4H8 507 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PHLDB2Q86SQ0 1253 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PIM3Q86V86 326 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 FJX1Q86VR8 437 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PHC2Q8IXK0 858 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms