RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 PLEKHG4BQ96PX9 1271 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 TEX101Q9BY14 249 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 FAM83DQ9H4H8 585 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 WDR26Q9H7D7 661 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 IL17CQ9P0M4 197 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 CD84Q9UIB8 345 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 PKP3Q9Y446 797 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 OR1A2Q9Y585 309 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 PCDHGB2Q9Y5G2 931 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 FAM186AA6NE01 2351 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 ZNF106Q9H2Y7 1883 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-226ENST00000521368 BPTFQ12830 3046 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 C2orf81A6NN90 581 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 C4orf47A7E2U8 309 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 K7ESM1 405 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 AP3B1O00203 1094 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 CACNB4O00305 520 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 PCDHGA12O60330 932 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 CRTAMO95727 393 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 SOD1P00441 154 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 MYCLP1P12525 358 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 TPSB2P20231 275 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 KELP23276 732 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 MAGEA6P43360 314 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 GPR1P46091 355 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 BASP1P80723 227 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 TPSAB1Q15661 275 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 TPRG1LQ5T0D9 272 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 PDPK2PQ6A1A2 396 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 SYDE1Q6ZW31 735 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 PELI3Q8N2H9 469 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 GPR26Q8NDV2 337 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 FUBP1Q96AE4 644 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 WDR92Q96MX6 357 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 RIOK2Q9BVS4 552 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 IL21RQ9HBE5 538 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 PHPT1Q9NRX4 125 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 CDV3Q9UKY7 258 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 FNDC3AQ9Y2H6 1198 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 CFAP54Q96N23 3096 aa13.73□□□□□ -0.21
CTNNA1-226ENST00000521368 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 TNFRSF10CO14798 259 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 SLC30A4O14863 429 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 SLC4A1P02730 911 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 CSF2P04141 144 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 NME1P15531 152 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 BPIP17213 487 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 LPOP22079 712 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 HNRNPKP61978 463 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 CDK3Q00526 305 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 GPS1Q13098 491 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 SHBQ15464 509 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 PPP1R21Q6ZMI0 780 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 KDM7AQ6ZMT4 941 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 HEATR4Q86WZ0 1026 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 DNAAF3Q8N9W5 541 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 OR2I1PQ8NGU4 316 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 COX14Q96I36 57 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 TBATAQ96M53 351 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 CASS4Q9NQ75 786 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
CTNNA1-226ENST00000521368 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 LRP4O75096 1905 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 MYLKQ15746 1914 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 H3BM21 787 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 LDB2O43679 373 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 SPAM1P38567 509 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 HADHAP40939 763 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 BLKP51451 505 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 ZNF140P52738 457 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 DR1Q01658 176 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 LAMB3Q13751 1172 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 PTK6Q13882 451 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 DHX34Q14147 1143 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 TRAM1L1Q8N609 369 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 SPATA4Q8NEY3 305 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 OR56A4Q8NGH8 313 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 SAP25Q8TEE9 199 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 BTN2A2Q8WVV5 523 aa13.71□□□□□ -0.21
CTNNA1-226ENST00000521368 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms