RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ANXA6P08133 673 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 CKMT1AP12532 417 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 CTSEP14091 401 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 SPINT3P49223 89 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 ELOCQ15369 112 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 CCDC70Q6NSX1 233 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 ZCCHC8Q6NZY4 707 aaKnown RBP20.58■□□□□ 0.89
TRIM35-203ENST00000521253 DARS2Q6PI48 645 aaKnown RBP20.58■□□□□ 0.89
TRIM35-203ENST00000521253 CCHCR1Q8TD31 782 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 EID2BQ96D98 161 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 MRGPRX2Q96LB1 330 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 FERMT1Q9BQL6 677 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 RIOK2Q9BVS4 552 aaKnown RBP20.58■□□□□ 0.89
TRIM35-203ENST00000521253 GBA3Q9H227 469 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 MAGEE1Q9HCI5 957 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 SHOC2Q9UQ13 582 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 MSRB2Q9Y3D2 182 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 U3KQA8 63 aa20.58■□□□□ 0.89
TRIM35-203ENST00000521253 LOC285095A0A1B0GVY8 99 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 TCRBV7S2A1N4TA0A589 114 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 KCNN4O15554 427 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 ILKQ13418 452 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 ADAMTSL4Q6UY14 1074 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 TMPRSS7Q7RTY8 843 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 TTC13Q8NBP0 860 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 WDR24Q96S15 920 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 FRMD8Q9BZ67 464 aaPredicted RBP20.57■□□□□ 0.88
TRIM35-203ENST00000521253 ZFYVE1Q9HBF4 777 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 USP29Q9HBJ7 922 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 CYP4F12Q9HCS2 524 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 PKD2L2Q9NZM6 624 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 MOSPD1Q9UJG1 213 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 R3HDM2Q9Y2K5 976 aaKnown RBP20.57■□□□□ 0.88
TRIM35-203ENST00000521253 ZNF711Q9Y462 761 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 SPO11Q9Y5K1 396 aa20.57■□□□□ 0.88
TRIM35-203ENST00000521253 PRSS38A1L453 326 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 RGSL1A5PLK6 1076 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 EPOP01588 193 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 SLC4A1P02730 911 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 CEACAM5P06731 702 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 MPP3Q13368 585 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 SMAD1Q15797 465 aaKnown RBP20.56■□□□□ 0.88
TRIM35-203ENST00000521253 ANKRD20A2Q5SQ80 823 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 MEI1Q5TIA1 1274 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 ANKRD20A1Q5TYW2 823 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 ANKRD20A3Q5VUR7 823 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 ITPRIPL1Q6GPH6 555 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 IPMKQ8NFU5 416 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 UBE2Q2Q8WVN8 375 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 ALS2CR12Q96Q35 445 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 GORASP1Q9BQQ3 440 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 BOCQ9BWV1 1114 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 FAM83DQ9H4H8 585 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 DOLKQ9UPQ8 538 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 PPP2R2CQ9Y2T4 447 aa20.56■□□□□ 0.88
TRIM35-203ENST00000521253 GOLGA4Q13439 2230 aaKnown RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 STK10O94804 968 aaKnown RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 FUCA1P04066 466 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 PYGLP06737 847 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 CDK4P11802 303 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 CHRNA4P43681 627 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 POLD2P49005 469 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 CLDN6P56747 220 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 RPS6KA1Q15418 735 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 SIRPB2Q5JXA9 342 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 C6orf132Q5T0Z8 1188 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 HENMT1Q5T8I9 393 aaKnown RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 TMC3Q7Z5M5 1100 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 TRIM74Q86UV6 250 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 SDR16C5Q8N3Y7 309 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 SLC25A41Q8N5S1 370 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 CCDC110Q8TBZ0 833 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 PTCD2Q8WV60 388 aaKnown RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 SPATA13Q96N96 652 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 TMEM121BQ9BXQ6 578 aaPredicted RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 GPR63Q9BZJ6 419 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 TMEM168Q9H0V1 697 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 CARS2Q9HA77 564 aaKnown RBP20.55■□□□□ 0.88
TRIM35-203ENST00000521253 SLC17A4Q9Y2C5 497 aa20.55■□□□□ 0.88
TRIM35-203ENST00000521253 FREM2Q5SZK8 3169 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 AURKAO14965 403 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 PSMB4P28070 264 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 TNNT3P45378 269 aaPredicted RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 DUSP3P51452 185 aaPredicted RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SLC1A5Q15758 541 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SEL1L2Q5TEA6 688 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 DOK6Q6PKX4 331 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 LVRNQ6Q4G3 990 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 CCNI2Q6ZMN8 369 aaPredicted RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 GKN2Q86XP6 184 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 MARCH9Q86YJ5 346 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SLC35F3Q8IY50 421 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 GALNT15Q8N3T1 639 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SCG3Q8WXD2 468 aaKnown RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 GATA6Q92908 595 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 HIC2Q96JB3 615 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SRPK1Q96SB4 655 aaKnown RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SUDS3Q9H7L9 328 aaPredicted RBP20.54■□□□□ 0.88
TRIM35-203ENST00000521253 NCKIPSDQ9NZQ3 722 aa20.54■□□□□ 0.88
TRIM35-203ENST00000521253 SUFUQ9UMX1 484 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms