RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 HNRNPA2B1P22626 353 aaKnown RBP15.29■□□□□ 0.04
LSM1-203ENST00000520755 NUDT1P36639 197 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 DPP6P42658 865 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 STC1P52823 247 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 SEPT6Q14141 434 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 TAF1AQ15573 450 aaPredicted RBP15.29■□□□□ 0.04
LSM1-203ENST00000520755 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
LSM1-203ENST00000520755 RFLNAQ6ZTI6 216 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 CENPUQ71F23 418 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 ASCL5Q7RTU5 278 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 ANKMY2Q8IV38 441 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 OR13C4Q8NGS5 318 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 BRSK1Q8TDC3 778 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 KIFC1Q9BW19 673 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 SMOC1Q9H4F8 434 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 MRM3Q9HC36 420 aaKnown RBP15.29■□□□□ 0.04
LSM1-203ENST00000520755 TM9SF3Q9HD45 589 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 CHRAC1Q9NRG0 131 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 TREX1Q9NSU2 369 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 SLC2A6Q9UGQ3 507 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 SUSD2Q9UGT4 822 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 DMTF1Q9Y222 760 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 CA5BQ9Y2D0 317 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 A0A1B0GTW7 788 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 HEATR9A2RTY3 570 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 SDR42E2A6NKP2 422 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PATE3B3GLJ2 98 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PRAMEF26H0Y7S4 382 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 WNT9AO14904 365 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 RAD51BO15315 384 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 RECQL5O94762 991 aaPredicted RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 CFIP05156 583 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 ZNF30P17039 623 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 ADRA1DP25100 572 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PSMA3P25788 255 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 NMBRP28336 390 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 AKT2P31751 481 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PTSQ03393 145 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 SPEM2Q0P670 501 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PCID2Q5JVF3 399 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PEAR1Q5VY43 1037 aaPredicted RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 STEAP4Q687X5 459 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 HSD11B1LQ7Z5J1 315 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 CBARPQ8N350 705 aaPredicted RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 DCLK2Q8N568 766 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 OR13J1Q8NGT2 312 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 C1orf216Q8TAB5 229 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 LRRC39Q96DD0 335 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 C9orf72Q96LT7 481 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 EBNA1BP2Q99848 306 aaKnown RBP15.28■□□□□ 0.04
LSM1-203ENST00000520755 C1QTNF7Q9BXJ2 289 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 GPR63Q9BZJ6 419 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 TRABDQ9H4I3 376 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 ZFYVE1Q9HBF4 777 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 IL17CQ9P0M4 197 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 TMEM131Q92545 1883 aa15.28■□□□□ 0.04
LSM1-203ENST00000520755 CCL22O00626 93 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 ARNTP27540 789 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 HOXD12P35452 270 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 HMGCLP35914 325 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 ETV3P41162 512 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 ARSDP51689 593 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 CLDN2P57739 230 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
LSM1-203ENST00000520755 ACVR1Q04771 509 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 STAT4Q14765 748 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 DUOXA1Q1HG43 343 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 TSTD2Q5T7W7 516 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 TMEM135Q86UB9 458 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 OR4K2Q8NGD2 314 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 PTCD2Q8WV60 388 aaKnown RBP15.27■□□□□ 0.04
LSM1-203ENST00000520755 ASB12Q8WXK4 309 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.04
LSM1-203ENST00000520755 MFSD3Q96ES6 412 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 COQ10AQ96MF6 247 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 FCRL3Q96P31 734 aaPredicted RBP15.27■□□□□ 0.04
LSM1-203ENST00000520755 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.04
LSM1-203ENST00000520755 EPB41L4BQ9H329 900 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 CDC42EP4Q9H3Q1 356 aaKnown RBP15.27■□□□□ 0.04
LSM1-203ENST00000520755 NINJ2Q9NZG7 142 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 CD84Q9UIB8 345 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.04
LSM1-203ENST00000520755 ZCWPW2A0A1B0GU75 182 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 FAM237BA0A1B0GVD1 139 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 PRR5-ARHGAP8B1AHC4 643 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 H0Y8X5 98 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 PSMD11O00231 422 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 GAPDHSO14556 408 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 FPGTO14772 594 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 CRTAMO95727 393 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 PCCBP05166 539 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms