RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 ECHDC3Q96DC8 303 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 PRR11Q96HE9 360 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 BTBD6Q96KE9 485 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 APOOQ9BUR5 198 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 SNRNP25Q9BV90 132 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 EDEM3Q9BZQ6 932 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 HAUS4Q9H6D7 363 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 ASCL3Q9NQ33 180 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 PADI4Q9UM07 663 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 ATP8A1Q9Y2Q0 1164 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 ENTPD2Q9Y5L3 495 aa9.32□□□□□ -0.92
CTNNA1-221ENST00000520339 ADAMTS20P59510 1910 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 A0A1W2PQC6 194 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 SMTNL1A8MU46 457 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 NTN3O00634 580 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 TRAFD1O14545 582 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 DAPK3O43293 454 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 LRCH4O75427 683 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 TCEA3O75764 348 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 PALMO75781 387 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 RASGRP1O95267 797 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 AMPD1P23109 780 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ARL4DP49703 201 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 SRP54P61011 504 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 IL10RBQ08334 325 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 RALGDSQ12967 914 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 DPYSQ14117 519 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 SEPT6Q14141 434 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 RFTN1Q14699 578 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ANO6Q4KMQ2 910 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 KCTD16Q68DU8 428 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 CRTC1Q6UUV9 634 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 RBM44Q6ZP01 1051 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ARHGAP36Q6ZRI8 547 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 GPR155Q7Z3F1 870 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 HID1Q8IV36 788 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 TP53INP2Q8IXH6 220 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 SDR16C5Q8N3Y7 309 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 NPWQ8N729 165 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ZNF248Q8NDW4 579 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 NKD1Q969G9 470 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ATXN7L3BQ96GX2 97 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 SLC46A1Q96NT5 459 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 FUCA2Q9BTY2 467 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 ATP13A3Q9H7F0 1226 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 CWC15Q9P013 229 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 CNOT8Q9UFF9 292 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 OR1A2Q9Y585 309 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 PCDHGA8Q9Y5G5 932 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 TRPM6Q9BX84 2022 aa9.31□□□□□ -0.92
CTNNA1-221ENST00000520339 EIF4E1BA6NMX2 242 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 DFFAO00273 331 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 OIP5O43482 229 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PRPSAP2O60256 369 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 RNF8O76064 485 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 RECQL5O94762 991 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 STK10O94804 968 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PEX11BO96011 259 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PCCBP05166 539 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 HOXC4P09017 264 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 ALPIP09923 528 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 GM2AP17900 193 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 IL1R2P27930 398 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 HTR1BP28222 390 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 SERPINA4P29622 427 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PCK1P35558 622 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PDX1P52945 283 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 BCL2L1Q07817 233 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 KLHL30Q0D2K2 578 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 MTM1Q13496 603 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 NR1I3Q14994 352 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 ELOCQ15369 112 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 FILIP1LQ4L180 1135 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PPP6R3Q5H9R7 873 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 CFAP58Q5T655 872 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 ESRP1Q6NXG1 681 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 LIPIQ6XZB0 460 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 DPPA4Q7L190 304 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 LZTR1Q8N653 840 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 ARL10Q8N8L6 244 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 KYQ8NBH2 561 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PLA2G15Q8NCC3 412 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 FBXO27Q8NI29 283 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PCDH19Q8TAB3 1148 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 WDR48Q8TAF3 677 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 NAF1Q96HR8 494 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 FCRL3Q96P31 734 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 LGMNQ99538 433 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 CCDC3Q9BQI4 270 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 CINPQ9BW66 212 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 ISCUQ9H1K1 167 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 SP110Q9HB58 689 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms