RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SCARB2Q14108 478 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 PNLIPRP3Q17RR3 467 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF628Q5EBL2 1059 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SLC18B1Q6NT16 456 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ANKRD54Q6NXT1 300 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 PARM1Q6UWI2 310 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SLC16A12Q6ZSM3 486 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 RD3Q7Z3Z2 195 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 PRIMA1Q86XR5 153 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 GUF1Q8N442 669 aaKnown RBP5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SPATA6LQ8N4H0 392 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 GPT2Q8TD30 523 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 PIGOQ8TEQ8 1089 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ERGIC1Q969X5 290 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 RMDN1Q96DB5 314 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 EGLN2Q96KS0 407 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 CFAP57Q96MR6 1250 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 TRMOQ9BU70 441 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 CCDC106Q9BWC9 280 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZWILCHQ9H900 591 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 EPB41L5Q9HCM4 733 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 DNAJB4Q9UDY4 337 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF112Q9UJU3 913 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ING1Q9UK53 422 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 A0A1W2PPC1 479 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 CCDC175P0C221 793 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 HOXD9P28356 352 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 ALDH7A1P49419 539 aaKnown RBP5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMP14P50281 582 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 TGFB2P61812 414 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 ECT2LQ008S8 904 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 GRIK2Q13002 908 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 LAMB3Q13751 1172 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF805Q5CZA5 627 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 IGSF11Q5DX21 431 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 PPP6R3Q5H9R7 873 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 COLEC12Q5KU26 742 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 IL27RAQ6UWB1 636 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 TRAPPC11Q7Z392 1133 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 GALNTL5Q7Z4T8 443 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 AACSQ86V21 672 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 ADGRG3Q86Y34 549 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 PALB2Q86YC2 1186 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 GALNT13Q8IUC8 556 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 CNGA4Q8IV77 575 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 COQ8BQ96D53 544 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 CHFRQ96EP1 664 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 QTRT1Q9BXR0 403 aaKnown RBP5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 RTN4RQ9BZR6 473 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMP27Q9H306 513 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 WDR26Q9H7D7 661 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 OSGIN1Q9UJX0 560 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF148Q9UQR1 794 aa5.36□□□□□ -1.55
HMGB1P46-201ENST00000520062 POLR2AP24928 1970 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 NUDT3O95989 172 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ICAM1P05362 532 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 CYC1P08574 325 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 CPT2P23786 658 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 THPOP40225 353 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 MSH2P43246 934 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZP1P60852 638 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 GRSF1Q12849 480 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMEL1Q495T6 779 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 DHRS7BQ6IAN0 325 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 MON1BQ7L1V2 547 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 TAOK1Q7L7X3 1001 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 YTHDF3Q7Z739 585 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 THNSL1Q8IYQ7 743 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 TSPAN14Q8NG11 270 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ARRDC2Q8TBH0 407 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ADAMTS14Q8WXS8 1223 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 TRIB2Q92519 343 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 VPS33AQ96AX1 596 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ARSGQ96EG1 525 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 PPP1R3EQ9H7J1 279 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 CLK4Q9HAZ1 481 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ADARB2Q9NS39 739 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 TMEM51Q9NW97 253 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 SELENONQ9NZV5 590 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 WDR35Q9P2L0 1181 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 CRNNQ9UBG3 495 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 OR14J1Q9UGF5 321 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 ACSL5Q9ULC5 683 aa5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.35□□□□□ -1.55
HMGB1P46-201ENST00000520062 MS4A18H0YCH9 400 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 H3BQ06 376 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 LDB2O43679 373 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 PSMD10O75832 226 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 HSP90AB1P08238 724 aaKnown RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 PRLRP16471 622 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 BUD31P41223 144 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 ME1P48163 572 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 COMPP49747 757 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 CCR3P51677 355 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 SIRPAP78324 504 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms