RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SUFUQ9UMX1 484 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ZNF487B1APH4 448 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 FGF1P05230 155 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 KDELR1P24390 212 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 GNPDA1P46926 289 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 DSC2Q02487 901 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 ZFP36L1Q07352 338 aaKnown RBP25.24■■□□□ 1.63
VEGFA-220ENST00000519767 PTPRRQ15256 657 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 CLPPQ16740 277 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-220ENST00000519767 VSIG1Q86XK7 387 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 CPNE8Q86YQ8 564 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 SLC35G2Q8TBE7 412 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 ZDHHC1Q8WTX9 485 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 SLC39A7Q92504 469 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 HDAC11Q96DB2 347 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 RNF157Q96PX1 679 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 TDRD1Q9BXT4 1180 aaKnown RBP25.24■■□□□ 1.63
VEGFA-220ENST00000519767 FOXP3Q9BZS1 431 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 TAAR2Q9P1P5 351 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 CHKBQ9Y259 395 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 CFAP46Q8IYW2 2715 aa25.24■■□□□ 1.63
VEGFA-220ENST00000519767 GCN1Q92616 2671 aaKnown RBP25.23■■□□□ 1.63
VEGFA-220ENST00000519767 UGT1A5P35504 534 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 GBE1Q04446 702 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 MESDQ14696 234 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 CCDC13Q8IYE1 715 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 RAPGEF5Q92565 580 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 CCDC42Q96M95 316 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 LYSMD1Q96S90 227 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 PCDH9Q9HC56 1237 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 DTLQ9NZJ0 730 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 TTLL3Q9Y4R7 772 aa25.23■■□□□ 1.63
VEGFA-220ENST00000519767 SMG1Q96Q15 3661 aaKnown RBP25.23■■□□□ 1.63
VEGFA-220ENST00000519767 LRP4O75096 1905 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 COL27A1Q8IZC6 1860 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-220ENST00000519767 PMS2P1A4D2B8 440 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 RHPN2P1A8MT19 583 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 MAP3K6O95382 1288 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 PRLP01236 227 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 ADCY8P40145 1251 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 POLD2P49005 469 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 STC1P52823 247 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 B4GALNT1Q00973 533 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 CTBSQ01459 385 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 RHDQ02161 417 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 VAC14Q08AM6 782 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 SLC10A2Q12908 348 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-220ENST00000519767 IHHQ14623 411 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.22■■□□□ 1.63
VEGFA-220ENST00000519767 EXD1Q8NHP7 514 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 SNRNP27Q8WVK2 155 aaKnown RBP25.22■■□□□ 1.63
VEGFA-220ENST00000519767 MAK16Q9BXY0 300 aaKnown RBP25.22■■□□□ 1.63
VEGFA-220ENST00000519767 CD84Q9UIB8 345 aa25.22■■□□□ 1.63
VEGFA-220ENST00000519767 UNC13CQ8NB66 2214 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 CAPN8A6NHC0 703 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 JCHAINP01591 159 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 JMJD7P0C870 316 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 GPR3P46089 330 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 NIPAL4Q0D2K0 466 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 ZNF438Q7Z4V0 828 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 PIM3Q86V86 326 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 SFTPA2Q8IWL1 248 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 RHOT2Q8IXI1 618 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 SCAMP4Q969E2 229 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 WBP1Q96G27 269 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 CDH19Q9H159 772 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 SUDS3Q9H7L9 328 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-220ENST00000519767 CPNE5Q9HCH3 593 aa25.21■■□□□ 1.63
VEGFA-220ENST00000519767 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.21■■□□□ 1.63
VEGFA-220ENST00000519767 A0A0U1RQS6 177 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 LRRD1A4D1F6 860 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 RGSL1A5PLK6 1076 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ERVH48-1M5A8F1 160 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 NVLO15381 856 aaKnown RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 B4GAT1O43505 415 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 MTA2O94776 668 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 SOD1P00441 154 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 HLA-DQB2P05538 268 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ZFXP17010 805 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 SLC5A2P31639 672 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 PPIDQ08752 370 aaKnown RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 C19orf57Q0VDD7 668 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 BIRC2Q13490 618 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ARHGAP40Q5TG30 622 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 LRRC38Q5VT99 294 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 SLC30A9Q6PML9 568 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 RFLNAQ6ZTI6 216 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 VSTM4Q8IW00 320 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 CMKLR1Q99788 373 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ANP32EQ9BTT0 268 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 RIOK2Q9BVS4 552 aaKnown RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ADGRE3Q9BY15 652 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 NHEJ1Q9H9Q4 299 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ABHD10Q9NUJ1 306 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 AKAP7Q9P0M2 348 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ACSL6Q9UKU0 697 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 ATXN7L1Q9ULK2 861 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-220ENST00000519767 TMEM98Q9Y2Y6 226 aa25.2■■□□□ 1.62
VEGFA-220ENST00000519767 SHROOM3Q8TF72 1996 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 CLDN7O95471 211 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms