RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ZNF711Q9Y462 761 aa11.49□□□□□ -0.57
SPIDR-212ENST00000519661 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
SPIDR-212ENST00000519661 TMEM131Q92545 1883 aa11.49□□□□□ -0.57
SPIDR-212ENST00000519661 TP53BP1Q12888 1972 aaPredicted RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 LY6G6EA0A0G2JKS1 128 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 NEMP2A6NFY4 417 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 CACNB4O00305 520 aaPredicted RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 PSMD3O43242 534 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 PMPCBO75439 489 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 TRIM16O95361 564 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 METTL18O95568 372 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 CEACAM5P06731 702 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 PSMB4P28070 264 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 NOVA1P51513 510 aaKnown RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 SEMG2Q02383 582 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 BNIP3Q12983 259 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 GALNT3Q14435 633 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 TRIP6Q15654 476 aaKnown RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 UAP1L1Q3KQV9 507 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 CCDC70Q6NSX1 233 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 KDM7AQ6ZMT4 941 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 HEATR4Q86WZ0 1026 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 PHACTR4Q8IZ21 702 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 TRAM1L1Q8N609 369 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 OR56A4Q8NGH8 313 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 CCHCR1Q8TD31 782 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 ATG4AQ8WYN0 398 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 SLCO2A1Q92959 643 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 SCAMP4Q969E2 229 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 AP2M1Q96CW1 435 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 ZSCAN5AQ9BUG6 496 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 LRRC61Q9BV99 259 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 BOCQ9BWV1 1114 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 LGR4Q9BXB1 951 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 FAM83DQ9H4H8 585 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 C10orf88Q9H8K7 445 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 FGF22Q9HCT0 170 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 EIF2B3Q9NR50 452 aaKnown RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 PHPT1Q9NRX4 125 aaPredicted RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 TRNAU1APQ9NX07 287 aaKnown RBP11.48□□□□□ -0.57
SPIDR-212ENST00000519661 SPASTQ9UBP0 616 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 RIMKLBQ9ULI2 386 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 NEU2Q9Y3R4 380 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 U3KQA8 63 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 LRP4O75096 1905 aa11.48□□□□□ -0.57
SPIDR-212ENST00000519661 SPEGQ15772 3267 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GOLGA6CA6NDK9 693 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 TMEM202A6NGA9 273 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PRR19A6NJB7 356 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 H7C0S8 307 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 TRIM38O00635 465 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GAPDHSO14556 408 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-212ENST00000519661 AQP9O43315 295 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 RASGRP1O95267 797 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 FUCA1P04066 466 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GOLGA6DP0CG33 693 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 BPIP17213 487 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 JUNDP17535 347 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 TCP1P17987 556 aaKnown RBP11.47□□□□□ -0.57
SPIDR-212ENST00000519661 ACP1P24666 158 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 FDFT1P37268 417 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 CHRNA4P43681 627 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 SRP54P61011 504 aaKnown RBP11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PDE1BQ01064 536 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PPARDQ03181 441 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PRPSAP1Q14558 356 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PRAMEF14Q5SWL7 426 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PSAPL1Q6NUJ1 521 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 OGFOD3Q6PK18 319 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 RFLNAQ6ZTI6 216 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 C17orf82Q86X59 251 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-212ENST00000519661 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GPR26Q8NDV2 337 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 BRSK1Q8TDC3 778 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 ADAMTS14Q8WXS8 1223 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PEX13Q92968 403 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 OSBPL9Q96SU4 736 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 FSD1LQ9BXM9 530 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 CLPBQ9H078 707 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 RMI1Q9H9A7 625 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 UCKL1Q9NWZ5 548 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 GOLGA6AQ9NYA3 693 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 UBP1Q9NZI7 540 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PYCARDQ9ULZ3 195 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 OR1A2Q9Y585 309 aa11.47□□□□□ -0.57
SPIDR-212ENST00000519661 PRSS38A1L453 326 aa11.46□□□□□ -0.57
SPIDR-212ENST00000519661 FADS2P1A8MWK0 482 aa11.46□□□□□ -0.57
SPIDR-212ENST00000519661 A8MX80 341 aa11.46□□□□□ -0.57
SPIDR-212ENST00000519661 ENC1O14682 589 aa11.46□□□□□ -0.57
SPIDR-212ENST00000519661 GIPC1O14908 333 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms