RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ZSWIM9Q86XI8 627 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 MINDY1Q8N5J2 469 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 HCAR2Q8TDS4 363 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 SIGLEC10Q96LC7 697 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 TUBGCP5Q96RT8 1024 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 RANBP9Q96S59 729 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 RUFY1Q96T51 708 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 EBNA1BP2Q99848 306 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 MGME1Q9BQP7 344 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 WRAP53Q9BUR4 548 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 CEP41Q9BYV8 373 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 CPEB1Q9BZB8 566 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 KDM4CQ9H3R0 1056 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 SUV39H2Q9H5I1 410 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 ATP13A3Q9H7F0 1226 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 MRM3Q9HC36 420 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 TMEM9BQ9NQ34 198 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 CASS4Q9NQ75 786 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 SEPT10Q9P0V9 454 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 DKK3Q9UBP4 350 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 RSPH14Q9UHP6 348 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 ACTL7BQ9Y614 415 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 GOLGA4Q13439 2230 aaKnown RBP7.61□□□□□ -1.19
SDCBP-206ENST00000519115 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
SDCBP-206ENST00000519115 ARID1BQ8NFD5 2236 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 FAM237BA0A1B0GVD1 139 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TSPAN11A1L157 253 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 IGLON5A6NGN9 336 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 HMGB1P1B2RPK0 211 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 H0Y8X5 98 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CDX4O14627 284 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SLC30A4O14863 429 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 AREL1O15033 823 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 AP1G1O43747 822 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CDH16O75309 829 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SASH3O75995 380 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 WNT1P04628 370 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 HLA-DQB2P05538 268 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 POLBP06746 335 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SYPP08247 313 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 MYZAPP0CAP1 466 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TIMP2P16035 220 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CR2P20023 1033 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 HLA-DPA1P20036 260 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CA4P22748 312 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ADRA1AP35348 466 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TNNT3P45378 269 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ID4P47928 161 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 POLD2P49005 469 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 LMAN1P49257 510 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SLC18A1P54219 525 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 RACK1P63244 317 aaKnown RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 PDE1BQ01064 536 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 DSC2Q02487 901 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 BCL2L1Q07817 233 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ITKQ08881 620 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TRAF2Q12933 501 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 PDIA2Q13087 525 aaKnown RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ZBTB17Q13105 803 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 DNAJC3Q13217 504 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CAMK2BQ13554 666 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 FGL2Q14314 439 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TEAD4Q15561 434 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 UAP1Q16222 522 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 KYNUQ16719 465 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 KIF19Q2TAC6 998 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 KLHL38Q2WGJ6 581 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TNFAIP8L3Q5GJ75 292 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 AGBL2Q5U5Z8 902 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 STEAP4Q687X5 459 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 KDM7AQ6ZMT4 941 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 C3orf62Q6ZUJ4 267 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 TMEM135Q86UB9 458 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 PALM2Q8IXS6 379 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 LMNTD2Q8IXW0 634 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 GABPB2Q8TAK5 448 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 PDCD6IPQ8WUM4 868 aaKnown RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 RAB7BQ96AH8 199 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SGSM3Q96HU1 749 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 FEM1CQ96JP0 617 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 NUDCD1Q96RS6 583 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CYTH2Q99418 400 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SEMA3CQ99985 751 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 KIFC1Q9BW19 673 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 EPB41L4BQ9H329 900 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 CDC42EP4Q9H3Q1 356 aaKnown RBP7.6□□□□□ -1.19
SDCBP-206ENST00000519115 IL21RQ9HBE5 538 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 NOD2Q9HC29 1040 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 LRRC4CQ9HCJ2 640 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 PCDH12Q9NPG4 1184 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 NSMCE4AQ9NXX6 385 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 MOCS1Q9NZB8 636 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 SENP1Q9P0U3 644 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ZNF180Q9UJW8 692 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 ANKRD6Q9Y2G4 727 aa7.6□□□□□ -1.19
SDCBP-206ENST00000519115 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms