RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TICAM1Q8IUC6 712 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 FOXRED2Q8IWF2 684 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 CHERPQ8IWX8 916 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 RPAP2Q8IXW5 612 aaPredicted RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 PGBD5Q8N414 524 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 SCFD2Q8WU76 684 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 TMED6Q8WW62 240 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 MTBPQ96DY7 904 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 RRNAD1Q96FB5 475 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 MED30Q96HR3 178 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 OR1F2PQ96R84 312 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 ACOX2Q99424 681 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 NCAPGQ9BPX3 1015 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 PCGF1Q9BSM1 259 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 IL25Q9H293 177 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 MAGIXQ9H6Y5 334 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 RRP7BPQ9NSQ0 103 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 MCM9Q9NXL9 1143 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 SMARCAL1Q9NZC9 954 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 TINAGQ9UJW2 476 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 ACSL5Q9ULC5 683 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 FRMD3A2A2Y4 597 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 ANKRD18BA2A2Z9 1011 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 MYO1GB0I1T2 1018 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 GTPBP1O00178 669 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SOCS6O14544 535 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 VCYO14598 125 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 TIPRLO75663 272 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 PTMAP06454 111 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 RARGP13631 454 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 TMEM11P17152 192 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 UBA1P22314 1058 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 HOXA13P31271 388 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 PPARGP37231 505 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 PRCPP42785 496 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CLCNKAP51800 687 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 MYBPHQ13203 477 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CTF1Q16619 201 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 EIF2S3LQ2VIR3 472 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 PCGF3Q3KNV8 242 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 JADE1Q6IE81 842 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CREB3L2Q70SY1 520 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 RBM23Q86U06 439 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 ADHFE1Q8IWW8 467 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CCDC13Q8IYE1 715 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 OR14L1PQ8NHC6 308 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 NUDCD2Q8WVJ2 157 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 RTP4Q96DX8 246 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SCMH1Q96GD3 660 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CCDC34Q96HJ3 373 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 PGAM5Q96HS1 289 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 C1orf74Q96LT6 269 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CMTM3Q96MX0 182 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SH2D4AQ9H788 454 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SYNCQ9H7C4 482 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 KAT14Q9H8E8 782 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SEPT11Q9NVA2 429 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 TERF2IPQ9NYB0 399 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 CWC15Q9P013 229 aaKnown RBP3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SNX9Q9Y5X1 595 aa3.69□□□□□ -1.82
VPS13B-207ENST00000518569 SRRM3A6NNA2 597 aaPredicted RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SPINT2O43291 252 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 DOK2O60496 412 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 OR2C1O95371 312 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 HSP90AA1P07900 732 aaKnown RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 TNFRSF8P28908 595 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SSTR2P30874 369 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 PSMB10P40306 273 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 UBA7P41226 1012 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 ART1P52961 327 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 CSNK2A1P68400 391 aaPredicted RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 MRPS34P82930 218 aaKnown RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 ZNF155Q12901 538 aaPredicted RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 DLG1Q12959 904 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 NAB2Q15742 525 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 KIF19Q2TAC6 998 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SETMARQ53H47 684 aaPredicted RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 DCST1Q5T197 706 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 WDR78Q5VTH9 848 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 PMS2CLQ68D20 193 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 NADSYN1Q6IA69 706 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 RHBDF2Q6PJF5 856 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SLC36A4Q6YBV0 504 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 MEPCEQ7L2J0 689 aaKnown RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 TSPAN33Q86UF1 283 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 ADGRF2Q8IZF7 708 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 WDTC1Q8N5D0 677 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 CSNK2A3Q8NEV1 391 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SPRY4Q9C004 299 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 SIL1Q9H173 461 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 ACSS1Q9NUB1 689 aaPredicted RBP3.68□□□□□ -1.82
VPS13B-207ENST00000518569 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 C1RLQ9NZP8 487 aa3.68□□□□□ -1.82
VPS13B-207ENST00000518569 FSD2A1L4K1 749 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 C4orf47A7E2U8 309 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 CDRT15L2A8MXV6 281 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 BTBD18B2RXH4 712 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 ACOT8O14734 319 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms