RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 CEACAM20Q6UY09 585 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 Q6ZVL8 140 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 KDELC2Q7Z4H8 507 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 SFRP1Q8N474 314 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 RNF31Q96EP0 1072 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 SCARF2Q96GP6 870 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 AHCYL2Q96HN2 611 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 CINPQ9BW66 212 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 GANQ9H2C0 597 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 GPATCH2LQ9NWQ4 482 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 ADAM22Q9P0K1 906 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
CTNNA1-205ENST00000517904 A0A0U1RQS6 177 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 GOLGA6CA6NDK9 693 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 GOLGA6BA6NDN3 693 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 NPIPB15A6NHN6 443 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 ARHGAP42A6NI28 874 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 SIGLEC16A6NMB1 481 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 HTRA2O43464 458 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 AGFG2O95081 481 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 MAP3K6O95382 1288 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PDGFAP04085 211 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 GOLGA6DP0CG33 693 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TNFAIP3P21580 790 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 GNLYP22749 145 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TEAD1P28347 426 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 VIPR1P32241 457 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 NSFP46459 744 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PPM1FP49593 454 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 KLK7P49862 253 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 AIF1P55008 147 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 AP1S1P61966 158 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 MC1RQ01726 317 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PEX6Q13608 980 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 CA9Q16790 459 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TPD52L1Q16890 204 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PYCR3Q53H96 274 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 WDR74Q6RFH5 385 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 RFLNAQ6ZTI6 216 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TSPAN33Q86UF1 283 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TP53INP2Q8IXH6 220 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 NPWQ8N729 165 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TEX19Q8NA77 164 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 OR10G6Q8NH81 332 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 MCEEQ96PE7 176 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PSKH2Q96QS6 385 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 OR2M4Q96R27 311 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 SLC38A3Q99624 504 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 TRIT1Q9H3H1 467 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 SIDT1Q9NXL6 827 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 GOLGA6AQ9NYA3 693 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 KCTD3Q9Y597 815 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PCDHGC4Q9Y5F7 938 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 PCYT1BQ9Y5K3 369 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
CTNNA1-205ENST00000517904 DFFAO00273 331 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 EEF2KO00418 725 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 EPHB6O15197 1021 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 CPP00450 1065 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 ZNF28P17035 718 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 MAN1A1P33908 653 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 HTR7P34969 479 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 JAM2P57087 298 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 OGDHQ02218 1023 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 MON1BQ7L1V2 547 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 TECPR1Q7Z6L1 1165 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 TMEM135Q86UB9 458 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 PHF13Q86YI8 300 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 FAM114A1Q8IWE2 563 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 ESX1Q8N693 406 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 MLKLQ8NB16 471 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 PDCD6IPQ8WUM4 868 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 NCSTNQ92542 709 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 VPS16Q9H269 839 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 SP110Q9HB58 689 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 PRDM8Q9NQV8 689 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 KCTD5Q9NXV2 234 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 KLHL3Q9UH77 587 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 AP4E1Q9UPM8 1137 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 SHANK1Q9Y566 2161 aa11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-205ENST00000517904 ESPL1Q14674 2120 aa11.27□□□□□ -0.6
CTNNA1-205ENST00000517904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-205ENST00000517904 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms