RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CRY1Q16526 586 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZNF674Q2M3X9 581 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 C5orf22Q49AR2 442 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC44A4Q53GD3 710 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 C2CD6Q53TS8 623 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 CCDC157Q569K6 752 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 TDRD12Q587J7 1177 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 DCAF6Q58WW2 860 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 EFHC1Q5JVL4 640 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PM20D1Q6GTS8 502 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ESRP1Q6NXG1 681 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 VITQ6UXI7 678 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 TMPRSS7Q7RTY8 843 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZER1Q7Z7L7 766 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 TMEM110Q86TL2 294 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZNF677Q86XU0 584 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 Q8N1Y9 231 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ATP11CQ8NB49 1132 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 GABPB2Q8TAK5 448 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 DEPDC1BQ8WUY9 529 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 IRGQQ8WZA9 623 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 EDAQ92838 391 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 RSPRY1Q96DX4 576 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 IQCDQ96DY2 449 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZNF764Q96H86 408 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 LRRC3BQ96PB8 259 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 CPXM1Q96SM3 734 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 AGPAT1Q99943 283 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 G6PC3Q9BUM1 346 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 DDX23Q9BUQ8 820 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 TRIM62Q9BVG3 475 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ITPAQ9BY32 194 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 GPR63Q9BZJ6 419 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 EDEM3Q9BZQ6 932 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 LINC00597Q9H2U6 94 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PRDM13Q9H4Q3 707 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 EBF3Q9H4W6 596 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 EPHX3Q9H6B9 360 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 HAUS4Q9H6D7 363 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 KIF9Q9HAQ2 790 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SP110Q9HB58 689 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 CNGB3Q9NQW8 809 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 HEBP1Q9NRV9 189 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ABCC13Q9NSE7 274 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.81□□□□□ -1.96
SKP1-204ENST00000517691 HPF1Q9NWY4 346 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MARCH2Q9P0N8 246 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 COX16Q9P0S2 106 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MYO1AQ9UBC5 1043 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 LAMP5Q9UJQ1 280 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 LSM7Q9UK45 103 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 CAPN11Q9UMQ6 739 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 NAALADL1Q9UQQ1 740 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SNX8Q9Y5X2 465 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 WNT6Q9Y6F9 365 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PIAS3Q9Y6X2 628 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 C5orf42Q9H799 3197 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 TRIP11Q15643 1979 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 VCANP13611 3396 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 VWA8A3KMH1 1905 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ANK1P16157 1881 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 A0A1W2PQJ5 194 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 TMEM221A6NGB7 291 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 AKR1B15C9JRZ8 316 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 H7BY64 318 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 M0R296 226 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MAN2B1O00754 1011 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC9A3R1O14745 358 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 CHADO15335 359 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PAPSS1O43252 624 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 AP5Z1O43299 807 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MSI1O43347 362 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 KIF5CO60282 957 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 NPHS1O60500 1241 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 FMO6PO60774 539 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC22A3O75751 556 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 FAM155BO75949 473 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 GYPCP04921 128 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZDHHC11BP0C7U3 371 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 BRAFP15056 766 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ARSAP15289 507 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 BTF3P20290 206 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 CD72P21854 359 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 FPR2P25090 351 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 RPL10P27635 214 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 ABCD3P28288 659 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC7A1P30825 629 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PBX1P40424 430 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 HARS2P49590 506 aaKnown RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZNF75DP51815 510 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 PNLIPRP1P54315 467 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SUMO3P55854 103 aaPredicted RBP2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC7A9P82251 487 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 COG7P83436 770 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 ZXDBP98169 803 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 CDK17Q00537 523 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 MC1RQ01726 317 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 SLC6A3Q01959 620 aa2.81□□□□□ -1.96
SKP1-204ENST00000517691 DSC2Q02487 901 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms