RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DOK6Q6PKX4 331 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 MFSD7Q6UXD7 560 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PHF13Q86YI8 300 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 TBC1D21Q8IYX1 336 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 KREMEN2Q8NCW0 462 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 FEM1CQ96JP0 617 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM126AQ9BYI3 521 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RHOBTB2Q9BYZ6 727 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 DNAJB4Q9UDY4 337 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 NT5C1B-RDH14C9J2C7 533 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 MSL3P1P0C860 447 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 DDX6P26196 483 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 ARL2P36404 184 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 MAPKAPK2P49137 400 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 FBXO46Q6PJ61 603 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 STRADAQ7RTN6 431 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SH3RF1Q7Z6J0 888 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SLC44A2Q8IWA5 706 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SHC3Q92529 594 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 LHX5Q9H2C1 402 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 MID1IP1Q9NPA3 183 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRKAG3Q9UGI9 489 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF37AP17032 561 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 HSF2Q03933 536 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 PPP3CAQ08209 521 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SMU1Q2TAY7 513 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 PCID2Q5JVF3 399 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 LDLRAP1Q5SW96 308 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 DNAJC19Q96DA6 116 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SOHLH2Q9NX45 425 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 ATG13O75143 517 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCNDBP1O95273 360 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 GJB6O95452 261 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 ALPPL2P10696 532 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 HNRNPH3P31942 346 aaKnown RBP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 NAGLUP54802 743 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 MARSP56192 900 aaKnown RBP12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 SCN1BQ07699 218 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 C6orf52Q5T4I8 152 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 AFTPHQ6ULP2 937 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 CHMP1BQ7LBR1 199 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 KCNMB4Q86W47 210 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 COLGALT2Q8IYK4 626 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM71AQ8IYT1 594 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 TMEM132CQ8N3T6 1108 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 OR56A4Q8NGH8 313 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 GRIN3AQ8TCU5 1115 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 LMO7Q8WWI1 1683 aa12.24□□□□□ -0.45
PCDHGA6-201ENST00000517434 B4GALT5O43286 388 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCNT2O60583 730 aaKnown RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 TGDSO95455 350 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 ASLP04424 464 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 CAPGP40121 348 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCNIQ14094 377 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 CA9Q16790 459 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 DDI2Q5TDH0 399 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 Q96MT0 163 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 RCOR3Q9P2K3 495 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 GTF2IRD1Q9UHL9 959 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 IKZF3Q9UKT9 509 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 INVSQ9Y283 1065 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 A0A0A0MRY4 1105 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 AOC2O75106 756 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SPATA31C1P0DKV0 1188 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 HOXB6P17509 224 aaKnown RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 ITIH1P19827 911 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 IL2P60568 153 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 PFKPQ01813 784 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 TAF10Q12962 218 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SPATA13Q96N96 652 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 EBF3Q9H4W6 596 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SAE1Q9UBE0 346 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 RAP2CQ9Y3L5 183 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 DGKBQ9Y6T7 804 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 M0QX08 132 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 TSPAN1O60635 241 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 FGF1P05230 155 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 SLC35G4P0C7Q5 338 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 GNSP15586 552 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 TCF4P15884 667 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 PEX2P28328 305 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 PARP15Q460N3 678 aa12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 PDE12Q6L8Q7 609 aaKnown RBP12.23□□□□□ -0.45
PCDHGA6-201ENST00000517434 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms