RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SETD7Q8WTS6 366 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 RSC1A1Q92681 617 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ABTB1Q969K4 478 aaPredicted RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 OLFM1Q99784 485 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CHCHD5Q9BSY4 110 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 PNNQ9H307 717 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ISG20L2Q9H9L3 353 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SEBOXQ9HB31 216 aaPredicted RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMEM30AQ9NV96 361 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 DUS2Q9NX74 493 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZDHHC7Q9NXF8 308 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CHPF2Q9P2E5 772 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 FBXO4Q9UKT5 387 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 OR2W1Q9Y3N9 320 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SEC16AO15027 2179 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CCDC88CQ9P219 2028 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 GTF3C1Q12789 2109 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 HMCN2Q8NDA2 5059 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 LRP1Q07954 4544 aaKnown RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 FAM208BQ5VWN6 2430 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 CELSR1Q9NYQ6 3014 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 FAM90A20PA6NIJ5 464 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 MPTX1A8MV57 137 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 AGPSO00116 658 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 MYO1CO00159 1063 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ADAM12O43184 909 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 SGTAO43765 313 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 OPA1O60313 960 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMCC1O94876 653 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 RASAL1O95294 804 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 HARSP12081 509 aaKnown RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ANPEPP15144 967 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 MYOD1P15172 320 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 PRKACGP22612 351 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 STAT1P42224 750 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 KHKP50053 298 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ISL1P61371 349 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 VLDLRP98155 873 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 PAX5Q02548 391 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 SNAPC2Q13487 334 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ELF2Q15723 593 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 PLA1AQ53H76 456 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ARL13AQ5H913 290 aaPredicted RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF667Q5HYK9 610 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 HYIQ5T013 277 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 PSRC1Q6PGN9 363 aaPredicted RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 FIP1L1Q6UN15 594 aaKnown RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZFP2Q6ZN57 461 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 HAUS6Q7Z4H7 955 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 C1orf87Q8N0U7 546 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 SPICE1Q8N0Z3 855 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 GMCL1P1Q8NEA9 526 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 OR10G8Q8NGN5 311 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 OR52I2Q8NH67 350 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF564Q8TBZ8 553 aaPredicted RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ADAD1Q96M93 576 aaKnown RBP-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 FNBP1Q96RU3 617 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF649Q9BS31 505 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 DEFB126Q9BYW3 111 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 C10orf88Q9H8K7 445 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZSCAN32Q9NX65 697 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 VNN3Q9NY84 501 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 SEL1LQ9UBV2 794 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 CDH22Q9UJ99 828 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF391Q9UJN7 358 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 CLCA3PQ9Y6N3 262 aa-1.21□□□□□ -2.6
SNORA40.16-201ENST00000517238 IGKV2-29A2NJV5 120 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 SHISA7A6NL88 538 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 A8MV72 311 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 EEF2KO00418 725 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CHL1O00533 1208 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 EIF3DO15371 548 aaKnown RBP eCLIP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CD3EAPO15446 510 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 HSPA12AO43301 675 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 N4BP1O75113 896 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 MED6O75586 246 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 PARP1P09874 1014 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 UMPSP11172 480 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 S1PR1P21453 382 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 PRDX5P30044 214 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TIA1P31483 386 aaKnown RBP eCLIP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 APLNRP35414 380 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CTCFP49711 727 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ERFP50548 548 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 WNT3P56703 355 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 GSDMDP57764 484 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ERVPABLB-1P60509 514 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 RACK1P63244 317 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ROR1Q01973 937 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF543Q08ER8 600 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TRA2AQ13595 282 aaKnown RBP eCLIP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 SF3A1Q15459 793 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ISXQ2M1V0 245 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 GPATCH4Q5T3I0 446 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 BROXQ5VW32 411 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 PPP4R3AQ6IN85 833 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF770Q6IQ21 691 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CLEC9AQ6UXN8 241 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 UBE2R2Q712K3 238 aaPredicted RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 SHFQ7M4L6 423 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms