RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CCDC91Q7Z6B0 441 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CPLX4Q7Z7G2 160 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 DSG4Q86SJ6 1040 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TSPAN33Q86UF1 283 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SFTPA1Q8IWL2 248 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SUGP1Q8IWZ8 645 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 STK40Q8N2I9 435 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CBARPQ8N350 705 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ARMC2Q8NEN0 867 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ACVR1CQ8NER5 493 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM45AQ8TCE6 357 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PBXIP1Q96AQ6 731 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 EID2BQ96D98 161 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CHFRQ96EP1 664 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF317Q96PQ6 595 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NDNQ99608 321 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TTC1Q99614 292 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 OMDQ99983 421 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM107BQ9H098 131 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NSRP1Q9H0G5 558 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CCDC68Q9H2F9 335 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TMEM245Q9H330 911 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RABEP2Q9H5N1 569 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM96AQ9H5X1 160 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 THAP10Q9P2Z0 257 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 B4GALT6Q9UBX8 382 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SUN2Q9UH99 717 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CRYL1Q9Y2S2 319 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ACOT9Q9Y305 439 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VWA7Q9Y334 891 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LRRK1Q38SD2 2015 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ATG2BQ96BY7 2078 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MYO10Q9HD67 2058 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PIKFYVEQ9Y2I7 2098 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C16orf96A6NNT2 1141 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C2CD4DB7Z1M9 353 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C1QTNF3-AMACRE9PGA6 284 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SOX1O00570 391 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NPC1O15118 1278 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BIRC5O15392 142 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MBTPS2O43462 519 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLIN3O60664 434 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SRP72O76094 671 aaKnown RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PRAMEF1O95521 474 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 APOA4P06727 396 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SLC35E2BP0CK96 405 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PRSS56P0CW18 603 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CHRM1P11229 460 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TIMP2P16035 220 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BPIP17213 487 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TAC1P20366 129 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LHCGRP22888 699 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PPARGP37231 505 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 IL12RB1P42701 662 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PTGER3P43115 390 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TNFRSF4P43489 277 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SOX9P48436 509 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CSRP3P50461 194 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GALK1P51570 392 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KPNA2P52292 529 aaKnown RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 IRX4P78413 519 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 IRF9Q00978 393 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SEMG2Q02383 582 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF460Q14592 562 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SKIV2LQ15477 1246 aaKnown RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZKSCAN8Q15776 578 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 DBN1Q16643 649 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TSNAXIP1Q2TAA8 658 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 POM121L1PQ3SYA9 428 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CCDC153Q494R4 210 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GPR33Q49SQ1 333 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LRRC73Q5JTD7 316 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C9orf64Q5T6V5 341 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LYPLAL1Q5VWZ2 237 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 EGFLAMQ63HQ2 1017 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PSAPL1Q6NUJ1 521 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ERAP2Q6P179 960 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM151BQ6UXP7 276 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CERS6Q6ZMG9 384 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RGS9BPQ6ZS82 235 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF771Q7L3S4 317 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TAS2R42Q7RTR8 314 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SNX20Q7Z614 316 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CLEC14AQ86T13 490 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TBC1D1Q86TI0 1168 aaPredicted RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TTC7BQ86TV6 843 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NUDCD3Q8IVD9 361 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CEP97Q8IW35 865 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PIANPQ8IYJ0 282 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LRRC34Q8IZ02 419 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLD6Q8N2A8 252 aaKnown RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLCD3Q8N3E9 789 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PNPLA1Q8N8W4 532 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TMIEQ8NEW7 156 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PIP4K2CQ8TBX8 421 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF473Q8WTR7 871 aaKnown RBP7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LPGAT1Q92604 370 aa7.61□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PPP1R16AQ96I34 528 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1103.1 ms