RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SERPINE1P05121 402 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 KCNA4P22459 653 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 NFKBIAP25963 317 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 PPARGP37231 505 aaPredicted RBP20.06■□□□□ 0.8
TRIO-223ENST00000515710 MTHFRP42898 656 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 SUOXP51687 545 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 PGGT1BP53609 377 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 PRKAA2P54646 552 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 CDKN2DP55273 166 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 SF3A3Q12874 501 aaKnown RBP eCLIP20.06■□□□□ 0.82e-8■■■□□ 17.3
TRIO-223ENST00000515710 IFT88Q13099 833 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 PSAPL1Q6NUJ1 521 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 TNS4Q8IZW8 715 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 STK40Q8N2I9 435 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 FSTL5Q8N475 847 aaPredicted RBP20.06■□□□□ 0.8
TRIO-223ENST00000515710 ZNF398Q8TD17 642 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 GPR78Q96P69 363 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 BRD9Q9H8M2 597 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 IL36AQ9UHA7 158 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 COMMD10Q9Y6G5 202 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 WASF2Q9Y6W5 498 aa20.06■□□□□ 0.8
TRIO-223ENST00000515710 ATXN2Q99700 1313 aaKnown RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 UBA6A0AVT1 1052 aaPredicted RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 SNNO75324 88 aaPredicted RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 WISP3O95389 354 aaPredicted RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 LTA4HP09960 611 aaKnown RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 MYL2P10916 166 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 RALBP11234 206 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 LAMP2P13473 410 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 PSMC3P17980 439 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 OCRLQ01968 901 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 DLG1Q12959 904 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 ZYG11AQ6WRX3 759 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 YTHDF3Q7Z739 585 aaKnown RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 PIANPQ8IYJ0 282 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 TMEM151AQ8N4L1 468 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 UBXN10Q96LJ8 280 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 TTC1Q99614 292 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 MRPL57Q9BQC6 102 aaKnown RBP20.05■□□□□ 0.8
TRIO-223ENST00000515710 TRIM55Q9BYV6 548 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 PLA2G2FQ9BZM2 168 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 IGSF5Q9NSI5 407 aa20.05■□□□□ 0.8
TRIO-223ENST00000515710 TSPAN11A1L157 253 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 NPIPB15A6NHN6 443 aaPredicted RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 PRRT4C9JH25 899 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 H2AFYO75367 372 aaKnown RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 SRP72O76094 671 aaKnown RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 PTGER3P43115 390 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 CDKN1CP49918 316 aaPredicted RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 ADARP55265 1226 aaKnown RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 CTC1Q2NKJ3 1217 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 ARSIQ5FYB1 569 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 LYPLAL1Q5VWZ2 237 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 ZDHHC20Q5W0Z9 365 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 KLC3Q6P597 504 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 TAS2R42Q7RTR8 314 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 HEXDCQ8WVB3 486 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 MRPL46Q9H2W6 279 aaKnown RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 FAM96AQ9H5X1 160 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 TARM1B6A8C7 271 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 LEFTY1O75610 366 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 CD9P21926 228 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 FMO4P31512 558 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 SPAM1P38567 509 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 CSHL1Q14406 222 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 ACAP2Q15057 778 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 PREPLQ4J6C6 727 aaPredicted RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 SNX20Q7Z614 316 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 ST13P5Q8NFI4 369 aaPredicted RBP20.04■□□□□ 0.8
TRIO-223ENST00000515710 GRIN3AQ8TCU5 1115 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 PPM1EQ8WY54 764 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 NXPE3Q969Y0 559 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 SYTL2Q9HCH5 934 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 DKK3Q9UBP4 350 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 USH1CQ9Y6N9 552 aa20.04■□□□□ 0.8
TRIO-223ENST00000515710 KIF26AQ9ULI4 1882 aaPredicted RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 TRIM13O60858 407 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 DNAJC6O75061 913 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 RHOBTB1O94844 696 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 KIAA0754O94854 1291 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 RBP1P09455 135 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 CCDC166P0CW27 439 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 CYP2A6P11509 494 aaPredicted RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 BMP1P13497 986 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 PKMP14618 531 aaKnown RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 BPIP17213 487 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 ITGALP20701 1170 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 EIF2DP41214 584 aaKnown RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 GLRBP48167 497 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 GRM2Q14416 872 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 CES4AQ5XG92 561 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 ZCCHC23Q6ZST2 131 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 TSPAN33Q86UF1 283 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 CRLF3Q8IUI8 442 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 SUGP1Q8IWZ8 645 aaKnown RBP20.03■□□□□ 0.8
TRIO-223ENST00000515710 PHTF2Q8N3S3 785 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 TERB1Q8NA31 727 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 OR6Y1Q8NGX8 325 aa20.03■□□□□ 0.8
TRIO-223ENST00000515710 UCMAQ8WVF2 138 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms