RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ABCG8Q9H221 673 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 FAM83DQ9H4H8 585 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 BPIFA1Q9NP55 256 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 RAB21Q9UL25 225 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 CHMP2BQ9UQN3 213 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 RPS6KL1Q9Y6S9 549 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 SPAG17Q6Q759 2223 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 BPTFQ12830 3046 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 CTIFO43310 598 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 PAK4O96013 591 aaPredicted RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 MYBL2P10244 700 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 PAMP19021 973 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 NMBRP28336 390 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 SPAM1P38567 509 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 MAGEA4P43358 317 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 SRSF5Q13243 272 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 SLMAPQ14BN4 828 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 LRRC14Q15048 493 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 ANKRD20A4Q4UJ75 823 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 SPANXN3Q5MJ09 141 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 HP1BP3Q5SSJ5 553 aaPredicted RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 HENMT1Q5T8I9 393 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 STEAP4Q687X5 459 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 ESRP1Q6NXG1 681 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 ANKMY2Q8IV38 441 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 ABCA7Q8IZY2 2146 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 MYRIPQ8NFW9 859 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 KLK6Q92876 244 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 CENPTQ96BT3 561 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 AP2M1Q96CW1 435 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 MFSD3Q96ES6 412 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 CDKN2AIPNLQ96HQ2 116 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 ZC3H10Q96K80 434 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 KLF6Q99612 283 aaPredicted RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 PARD6BQ9BYG5 372 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 IL26Q9NPH9 171 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 SLC2A6Q9UGQ3 507 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 APPL1Q9UKG1 709 aa20.91■□□□□ 0.94
LSM6-207ENST00000515311 TNRC6BQ9UPQ9 1833 aaKnown RBP20.91■□□□□ 0.94
LSM6-207ENST00000515311 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 GLYATL1P3A0A0U1RQE8 302 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 CCDC78A2IDD5 438 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 SLC31A1O15431 190 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 PYGLP06737 847 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 HNRNPA2B1P22626 353 aaKnown RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 CD27P26842 260 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 FRG1Q14331 258 aaKnown RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 NAA30Q147X3 362 aaPredicted RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 CRYMQ14894 314 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 ELF2Q15723 593 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 WSCD2Q2TBF2 565 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 PMS2CLQ68D20 193 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 KIAA0930Q6ICG6 404 aaPredicted RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 SLC41A1Q8IVJ1 513 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 TMEFF1Q8IYR6 380 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 TP53I13Q8NBR0 393 aaPredicted RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 ZNF669Q96BR6 464 aaPredicted RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 SGSM3Q96HU1 749 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 HSPA12BQ96MM6 686 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 FCRL3Q96P31 734 aaPredicted RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 TRIM56Q9BRZ2 755 aaKnown RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 ZSCAN5AQ9BUG6 496 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 RIOK2Q9BVS4 552 aaKnown RBP20.9■□□□□ 0.94
LSM6-207ENST00000515311 CD84Q9UIB8 345 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 FKBPLQ9UIM3 349 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 FAM169AQ9Y6X4 670 aa20.9■□□□□ 0.94
LSM6-207ENST00000515311 ZCWPW2A0A1B0GU75 182 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 A0A1W2PPC4 97 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 GOLGA8CPA6NN73 597 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 MEI4A8MW99 385 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 PRAMEF26H0Y7S4 382 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 GAPDHSO14556 408 aaPredicted RBP20.89■□□□□ 0.93
LSM6-207ENST00000515311 TEAD1P28347 426 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 AKT2P31751 481 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 ARSDP51689 593 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 TMPRSS15P98073 1019 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 XIAPP98170 497 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 PLK5Q496M5 336 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 PDPK2PQ6A1A2 396 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 ZC3H14Q6PJT7 736 aaKnown RBP20.89■□□□□ 0.93
LSM6-207ENST00000515311 CES3Q6UWW8 571 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 UNC5AQ6ZN44 842 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 GSPT2Q8IYD1 628 aaKnown RBP20.89■□□□□ 0.93
LSM6-207ENST00000515311 TRAM1L1Q8N609 369 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.89■□□□□ 0.93
LSM6-207ENST00000515311 DNASE2BQ8WZ79 361 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 SCAMP4Q969E2 229 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 HDAC10Q969S8 669 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 CFAP36Q96G28 342 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 ORAI3Q9BRQ5 295 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 EBF2Q9HAK2 575 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 PLAC1Q9HBJ0 212 aa20.89■□□□□ 0.93
LSM6-207ENST00000515311 CCDC162PA2VCL2 907 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 CCL22O00626 93 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 RAD51BO15315 384 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 RHOBTB1O94844 696 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 PRAMEF1O95521 474 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 GSTA2P09210 222 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 FAM153BP0C7A2 387 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 TSHRP16473 764 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms