RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, human

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNGA1-208	ENST00000514520	PRR35	P0CG20	571 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	KCNE1	P15382	129 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	IBSP	P21815	317 aa	Predicted RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PAX3	P23760	479 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ANXA13	P27216	316 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	RPL9	P32969	192 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PNPLA4	P41247	253 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PRKCI	P41743	596 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ZNF135	P52742	658 aa	Predicted RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	LIMK1	P53667	647 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	NAP1L1	P55209	391 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	NXPH1	P58417	271 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MYL6	P60660	151 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CUL2	Q13617	745 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	HTR4	Q13639	388 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	LLGL1	Q15334	1064 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ZBTB6	Q15916	424 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ETFDH	Q16134	617 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ZNF699	Q32M78	642 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ARHGAP29	Q52LW3	1261 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MTX3	Q5HYI7	312 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ZNF667	Q5HYK9	610 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CLLU1OS	Q5K130	101 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CCDC122	Q5T0U0	273 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	RBM20	Q5T481	1227 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	JADE1	Q6IE81	842 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	DCLRE1A	Q6PJP8	1040 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	RAD9B	Q6WBX8	426 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	KIAA1328	Q86T90	577 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	FAM90A1	Q86YD7	464 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CCAR2	Q8N163	923 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	VPS52	Q8N1B4	723 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	FKBP10	Q96AY3	582 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	HPDL	Q96IR7	371 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	RPS6KC1	Q96S38	1066 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MYADM	Q96S97	322 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MMS19	Q96T76	1030 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	AGPAT1	Q99943	283 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PI4K2A	Q9BTU6	479 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MRPL9	Q9BYD2	267 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ACTRT3	Q9BYD9	372 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	KRTAP1-5	Q9BYS1	174 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MTMR12	Q9C0I1	747 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	GAN	Q9H2C0	597 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CYP3A43	Q9HB55	503 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	WDR6	Q9NNW5	1121 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	SEPT11	Q9NVA2	429 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	MKS1	Q9NXB0	559 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	CALCOCO1	Q9P1Z2	691 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	ITGA11	Q9UKX5	1188 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	KIAA1257	Q9ULG3	409 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PYCARD	Q9ULZ3	195 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	PPP2R2C	Q9Y2T4	447 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	HES2	Q9Y543	173 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	DOCK5	Q9H7D0	1870 aa		4.24	□□□□□ -1.73
CNGA1-208	ENST00000514520	C2orf16	Q68DN1	1984 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	MYO10	Q9HD67	2058 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	MIA3	Q5JRA6	1907 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	WDR87	Q6ZQQ6	2873 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	ARL5C	A6NH57	179 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	KPNA7	A9QM74	516 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520		F8VZ95	297 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	PIR	O00625	290 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	MED7	O43513	233 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	KIF5C	O60282	957 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	HUS1	O60921	280 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	VPS4B	O75351	444 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CXCL14	O95715	111 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	ASS1	P00966	412 aa	Known RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	ALDH2	P05091	517 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	RET	P07949	1114 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	PLEK	P08567	350 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	H2AFZ	P0C0S5	128 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	GZMA	P12544	262 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	TDGF1	P13385	188 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CYP11B1	P15538	503 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CD58	P19256	250 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CA8	P35219	290 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	GNL1	P36915	607 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	RPS9	P46781	194 aa	Known RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CDKN1C	P49918	316 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CCT8	P50990	548 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CLCN4	P51793	760 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	TNNC1	P63316	161 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	CSTF1	Q05048	431 aa	Known RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	GFPT1	Q06210	699 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	PIGF	Q07326	219 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	MTF1	Q14872	753 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	NAB2	Q15742	525 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	MLF2	Q15773	248 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	SLC18A3	Q16572	532 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	XKR4	Q5GH76	650 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	SPOPL	Q6IQ16	392 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	PPP1R2P3	Q6NXS1	205 aa		4.23	□□□□□ -1.73
CNGA1-208	ENST00000514520	ALKBH5	Q6P6C2	394 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms