RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ADCY8P40145 1251 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 PBX1P40424 430 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 ARSEP51690 589 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 PTSQ03393 145 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 DPTQ07507 201 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 ITKQ08881 620 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 KRT81Q14533 505 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 LRRC66Q68CR7 880 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 USP45Q70EL2 814 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 TRIM74Q86UV6 250 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 VASH2Q86V25 355 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 PIM3Q86V86 326 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 ZFAND4Q86XD8 727 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.17□□□□□ -0.464e-16■■□□□ 14.4
SNHG4-208ENST00000514110 EXD3Q8N9H8 876 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 FAM71BQ8TC56 605 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 TMEM159Q96B96 161 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 SCARF2Q96GP6 870 aaPredicted RBP12.17□□□□□ -0.46
SNHG4-208ENST00000514110 AGAP2Q99490 1192 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 TMEM98Q9Y2Y6 226 aa12.17□□□□□ -0.46
SNHG4-208ENST00000514110 BZW2Q9Y6E2 419 aaKnown RBP12.17□□□□□ -0.46
SNHG4-208ENST00000514110 A0A087X0T9 212 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 IGHV5-10-1A0A0J9YXX1 117 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 A0A0J9YYE9 177 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 B8ZZF3 427 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 TRBC1P01850 177 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 FAM228BP0C875 321 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 CCL4P13236 92 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 WT1P19544 449 aaPredicted RBP12.16□□□□□ -0.46
SNHG4-208ENST00000514110 GARSP41250 739 aaKnown RBP12.16□□□□□ -0.46
SNHG4-208ENST00000514110 GPR1P46091 355 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 FANCCQ00597 558 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 DSC2Q02487 901 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 DPYSL3Q14195 570 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 LINC00303Q3SY05 128 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 ATP13A4Q4VNC1 1196 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 NKAIN2Q5VXU1 208 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 ADAMTSL4Q6UY14 1074 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 DTX1Q86Y01 620 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 RCBTB1Q8NDN9 531 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 LRRN4Q8WUT4 740 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 CPLX3Q8WVH0 158 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 MAML1Q92585 1016 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
SNHG4-208ENST00000514110 SCAMP4Q969E2 229 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 AP2M1Q96CW1 435 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 CCDC74BQ96LY2 380 aa12.16□□□□□ -0.46
SNHG4-208ENST00000514110 RCOR3Q9P2K3 495 aaPredicted RBP12.16□□□□□ -0.46
SNHG4-208ENST00000514110 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 MYO1FO00160 1098 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 SERPING1P05155 500 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 GJC1P36383 396 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ACTR1BP42025 376 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 SSR1P43307 286 aaKnown RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 GPR3P46089 330 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ARSDP51689 593 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ACTR1AP61163 376 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 GALNT2Q10471 571 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 PAFAH1B3Q15102 231 aaKnown RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 NFKBIBQ15653 356 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 PYCR3Q53H96 274 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ALG1LQ6GMV1 187 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 MARK2Q7KZI7 788 aaKnown RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 EXTL1Q92935 676 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 PMEPA1Q969W9 287 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 OR2M4Q96R27 311 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 POLR1EQ9GZS1 481 aaKnown RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 CDH19Q9H159 772 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 SEPT10Q9P0V9 454 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 CHKBQ9Y259 395 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 PCYT1BQ9Y5K3 369 aaPredicted RBP12.15□□□□□ -0.46
SNHG4-208ENST00000514110 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
SNHG4-208ENST00000514110 ASH1LQ9NR48 2969 aaKnown RBP12.15□□□□□ -0.47
SNHG4-208ENST00000514110 PIEZO2Q9H5I5 2752 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 HGSO14964 777 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 MATN3O15232 486 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 INPP4BO15327 924 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CLDN7O95471 211 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 PRLP01236 227 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 FGF3P11487 239 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF30P17039 623 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CCNCP24863 283 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 MPSTP25325 297 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CSF2RBP32927 897 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 STC1P52823 247 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 LIMK2P53671 638 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 TAS2R40P59535 323 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ZBED6P86452 979 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 NIPAL4Q0D2K0 466 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 BIRC2Q13490 618 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms