RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 PCDH12Q9NPG4 1184 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 DPP3Q9NY33 737 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 SPG21Q9NZD8 308 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 CACNG4Q9UBN1 327 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 SIX4Q9UIU6 781 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 ADAM28Q9UKQ2 775 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 MRPS17Q9Y2R5 130 aaKnown RBP5.01□□□□□ -1.61
SNX25-206ENST00000513433 ACACBO00763 2458 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 PTPRDP23468 1912 aa5.01□□□□□ -1.61
SNX25-206ENST00000513433 PLXNA3P51805 1871 aa5□□□□□ -1.61
SNX25-206ENST00000513433 C5orf42Q9H799 3197 aa5□□□□□ -1.61
SNX25-206ENST00000513433 PATJQ8NI35 1801 aa5□□□□□ -1.61
SNX25-206ENST00000513433 ZNF292O60281 2723 aa5□□□□□ -1.61
SNX25-206ENST00000513433 ARHGEF37A1IGU5 675 aa5□□□□□ -1.61
SNX25-206ENST00000513433 EPOPA6NHQ4 379 aa5□□□□□ -1.61
SNX25-206ENST00000513433 KCNJ18B7U540 433 aa5□□□□□ -1.61
SNX25-206ENST00000513433 F8W810 466 aa5□□□□□ -1.61
SNX25-206ENST00000513433 H3BNC9 293 aa5□□□□□ -1.61
SNX25-206ENST00000513433 M0QZQ0 153 aa5□□□□□ -1.61
SNX25-206ENST00000513433 P4HA2O15460 535 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TRAPPC3O43617 180 aa5□□□□□ -1.61
SNX25-206ENST00000513433 FGF18O76093 207 aa5□□□□□ -1.61
SNX25-206ENST00000513433 B3GAT3O94766 335 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TRIM49P0CI25 452 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TRIM49CP0CI26 452 aa5□□□□□ -1.61
SNX25-206ENST00000513433 ATICP31939 592 aa5□□□□□ -1.61
SNX25-206ENST00000513433 PIK3CAP42336 1068 aa5□□□□□ -1.61
SNX25-206ENST00000513433 OR1G1P47890 313 aa5□□□□□ -1.61
SNX25-206ENST00000513433 KCNJ5P48544 419 aa5□□□□□ -1.61
SNX25-206ENST00000513433 FMO5P49326 533 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TAF6P49848 677 aa5□□□□□ -1.61
SNX25-206ENST00000513433 LINC00205P59089 165 aa5□□□□□ -1.61
SNX25-206ENST00000513433 RBP5P82980 135 aa5□□□□□ -1.61
SNX25-206ENST00000513433 MYL7Q01449 175 aa5□□□□□ -1.61
SNX25-206ENST00000513433 ELAVL2Q12926 359 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 KCNJ12Q14500 433 aa5□□□□□ -1.61
SNX25-206ENST00000513433 CBWD6Q4V339 395 aa5□□□□□ -1.61
SNX25-206ENST00000513433 KLHL22Q53GT1 634 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TCP11X2Q5H9J9 407 aa5□□□□□ -1.61
SNX25-206ENST00000513433 CBWD3Q5JTY5 395 aa5□□□□□ -1.61
SNX25-206ENST00000513433 CBWD5Q5RIA9 395 aa5□□□□□ -1.61
SNX25-206ENST00000513433 SPOUT1Q5T280 376 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 C10orf25Q5T742 122 aa5□□□□□ -1.61
SNX25-206ENST00000513433 LMBRD2Q68DH5 695 aaPredicted RBP5□□□□□ -1.61
SNX25-206ENST00000513433 KRT39Q6A163 491 aa5□□□□□ -1.61
SNX25-206ENST00000513433 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
SNX25-206ENST00000513433 FUT10Q6P4F1 479 aa5□□□□□ -1.61
SNX25-206ENST00000513433 DCLRE1AQ6PJP8 1040 aa5□□□□□ -1.61
SNX25-206ENST00000513433 CD300LGQ6UXG3 332 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TRAPPC11Q7Z392 1133 aa5□□□□□ -1.61
SNX25-206ENST00000513433 PIP4P1Q86T03 277 aa5□□□□□ -1.61
SNX25-206ENST00000513433 GPR65Q8IYL9 337 aa5□□□□□ -1.61
SNX25-206ENST00000513433 SPATA18Q8TC71 538 aa5□□□□□ -1.61
SNX25-206ENST00000513433 GDPD5Q8WTR4 605 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TAF4BQ92750 862 aa5□□□□□ -1.61
SNX25-206ENST00000513433 FYTTD1Q96QD9 318 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 HERC2P3Q9BVR0 1158 aa5□□□□□ -1.61
SNX25-206ENST00000513433 COLEC11Q9BWP8 271 aa5□□□□□ -1.61
SNX25-206ENST00000513433 VN1R3Q9BXE9 311 aa5□□□□□ -1.61
SNX25-206ENST00000513433 LMAN2LQ9H0V9 348 aa5□□□□□ -1.61
SNX25-206ENST00000513433 ZBP1Q9H171 429 aa5□□□□□ -1.61
SNX25-206ENST00000513433 TSPY26PQ9H489 355 aa5□□□□□ -1.61
SNX25-206ENST00000513433 FAM124BQ9H5Z6 455 aaPredicted RBP5□□□□□ -1.61
SNX25-206ENST00000513433 SAMSN1Q9NSI8 373 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 PIH1D1Q9NWS0 290 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 GDAP2Q9NXN4 497 aa5□□□□□ -1.61
SNX25-206ENST00000513433 PRG3Q9Y2Y8 225 aaPredicted RBP5□□□□□ -1.61
SNX25-206ENST00000513433 LUC7L2Q9Y383 392 aaKnown RBP5□□□□□ -1.61
SNX25-206ENST00000513433 COQ4Q9Y3A0 265 aa5□□□□□ -1.61
SNX25-206ENST00000513433 WDFY4Q6ZS81 3184 aa5□□□□□ -1.61
SNX25-206ENST00000513433 MTCL1Q9Y4B5 1905 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 NCOR2Q9Y618 2525 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 CHD9Q3L8U1 2897 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 FSD2A1L4K1 749 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 GTPBP10A4D1E9 387 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 BECN2A8MW95 431 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 KPNA7A9QM74 516 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 SYN3O14994 580 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 TADA2AO75478 443 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 VNN1O95497 513 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 ASS1P00966 412 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 HLA-DRAP01903 254 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 AFPP02771 609 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 KRT19P08727 400 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 CTSAP10619 480 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 ODC1P11926 461 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 ALADP13716 330 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 TYMPP19971 482 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 FPR3P25089 353 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 THBS4P35443 961 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 MTIF2P46199 727 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 GCLMP48507 274 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 GLUD2P49448 558 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 RAB1AP62820 205 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 NOP14P78316 857 aaKnown RBP4.99□□□□□ -1.61
SNX25-206ENST00000513433 E2F1Q01094 437 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 KRT17Q04695 432 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 BIRC3Q13489 604 aa4.99□□□□□ -1.61
SNX25-206ENST00000513433 CAMK1Q14012 370 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms