RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 SETD4Q9NVD3 440 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 HAO1Q9UJM8 370 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 CARD8Q9Y2G2 431 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 KCNE2Q9Y6J6 123 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 POLR1AO95602 1720 aaPredicted RBP2.95□□□□□ -1.94
SMAD5-208ENST00000513418 LRPPRCP42704 1394 aaKnown RBP2.95□□□□□ -1.94
SMAD5-208ENST00000513418 GPRASP1Q5JY77 1395 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 ABCC11Q96J66 1382 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 USP47Q96K76 1375 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 ARHGAP23Q9P227 1491 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 NRXN1Q9ULB1 1477 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 DIP2AQ14689 1571 aa2.95□□□□□ -1.94
SMAD5-208ENST00000513418 ITIH6Q6UXX5 1313 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 NPHP4O75161 1426 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 PIK3C2GO75747 1445 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 YTHDC2Q9H6S0 1430 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 CKAP5Q14008 2032 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 FRMD3A2A2Y4 597 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 KDM4EB2RXH2 506 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 VCYO14598 125 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 SPRY3O43610 288 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ITM2AO43736 263 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 NDUFS7O75251 213 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 MT-CYBP00156 380 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 HSPA1AP0DMV8 641 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 HSPA1BP0DMV9 641 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ACSL1P33121 698 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 HOXD13P35453 343 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ENTPD1P49961 510 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 HTR6P50406 440 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 MXI1P50539 228 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 RARSP54136 660 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 RPL7AP62424 266 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 OLR1P78380 273 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ADORA2A-AS1P86434 159 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 SPOCK1Q08629 439 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ITGADQ13349 1161 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 DHX34Q14147 1143 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ASTE1Q2TB18 679 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 GKAP1Q5VSY0 366 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 OTUD1Q5VV17 481 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 NCAPH2Q6IBW4 605 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 RAD9BQ6WBX8 426 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 CCDC129Q6ZRS4 1044 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 NEK10Q6ZWH5 1172 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 AACSQ86V21 672 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 GLCCI1Q86VQ1 547 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 PALB2Q86YC2 1186 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 NGEFQ8N5V2 710 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 ETNPPLQ8TBG4 499 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 USP6NLQ92738 828 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 GTF3C6Q969F1 213 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 MIB2Q96AX9 1013 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 PRAM1Q96QH2 718 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 STRA6Q9BX79 667 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 RBM38Q9H0Z9 239 aaKnown RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 MUC13Q9H3R2 512 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 PRKRIP1Q9H875 184 aaPredicted RBP2.94□□□□□ -1.94
SMAD5-208ENST00000513418 LRRC4Q9HBW1 653 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 TMEM51Q9NW97 253 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 CEPT1Q9Y6K0 416 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 STON1Q9Y6Q2 735 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 MED14O60244 1454 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 IQGAP1P46940 1657 aa2.94□□□□□ -1.94
SMAD5-208ENST00000513418 CHD2O14647 1828 aaKnown RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 LINC01553A4QN01 128 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 LIPT2A6NK58 231 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 OR6C75A6NL08 312 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 LRRC53A6NM62 1247 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 USP17L23D6RBM5 183 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 F5H0A9 414 aaPredicted RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 GTPBP1O00178 669 aaKnown RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 HSPA12AO43301 675 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 SEC14L2O76054 403 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 WISP2O76076 250 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 VNN2O95498 520 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 DDX58O95786 925 aaKnown RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 IRF1P10914 325 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 PCNAP12004 261 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 NAGAP17050 411 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 MYF6P23409 242 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 CHMP24386 653 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 HSPA2P54652 639 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 SORDQ00796 357 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 SETQ01105 290 aaPredicted RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 RUNX1T1Q06455 604 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 DDR1Q08345 913 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 NFATC4Q14934 902 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 TOMM20Q15388 145 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 CCNG2Q16589 344 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 TCTN1Q2MV58 587 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 FSCBQ5H9T9 825 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 DNTTIP2Q5QJE6 756 aaKnown RBP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 HYIQ5T013 277 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 TSSK4Q6SA08 328 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMAD5-208ENST00000513418 CFAP77Q6ZQR2 320 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 IKBIPQ70UQ0 350 aa2.93□□□□□ -1.94
SMAD5-208ENST00000513418 PATL1Q86TB9 770 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms