RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CPSF7Q8N684 471 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 P2RY11Q96G91 374 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SERPINB11Q96P15 392 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 ATXN3LQ9H3M9 355 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 KAT8Q9H7Z6 458 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 IKZF3Q9UKT9 509 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 H0YC42 278 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SLC22A3O75751 556 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 IFNA14P01570 189 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 HOXB6P17509 224 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 NFKB1P19838 968 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 MAGEA10P43363 369 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TUFMP49411 452 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TUBA1BP68363 451 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 OLR1P78380 273 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 CA9Q16790 459 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SLC39A12Q504Y0 691 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 RBM48Q5RL73 367 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TMEM198Q66K66 360 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 FSTL4Q6MZW2 842 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 RETSATQ6NUM9 610 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SLC22A16Q86VW1 577 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 MCOLN3Q8TDD5 553 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TRUB1Q8WWH5 349 aaKnown RBP11.24□□□□□ -0.61
TCOF1-211ENST00000513346 MAGEE1Q9HCI5 957 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 STOML2Q9UJZ1 356 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 BTRCQ9Y297 605 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 PEX16Q9Y5Y5 336 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 TEX264Q9Y6I9 313 aa11.24□□□□□ -0.61
TCOF1-211ENST00000513346 ILVBLA1L0T0 632 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CCRL2O00421 344 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 BCKDKO14874 412 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 B4GALT5O43286 388 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 RAMP2O60895 175 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GCATO75600 419 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GABBR2O75899 941 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 IVDP26440 423 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 PRKCQQ04759 706 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 MAPKAPK3Q16644 382 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 HSDL1Q3SXM5 330 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 TIGD2Q4W5G0 525 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 EPGNQ6UW88 154 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ANKS3Q6ZW76 656 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 A0A1W2PQ72 361 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 IPO13O94829 963 aaKnown RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GOT1P17174 413 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ALDH4A1P30038 563 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 S100A3P33764 101 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 YAP1P46937 504 aaKnown RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CYP2U1Q7Z449 544 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ALG2Q9H553 416 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SYNDIG1Q9H7V2 258 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 TRPV5Q9NQA5 729 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 OAZ3Q9UMX2 235 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 F8W810 466 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 TK2O00142 265 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 MYL12BO14950 172 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 NOS1APO75052 506 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SEC22BO75396 215 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ERBB2P04626 1255 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CDH13P55290 713 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GAD2Q05329 585 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 WSCD1Q658N2 575 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ABHD15Q6UXT9 468 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 UNC93AQ86WB7 457 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 LRRC17Q8N6Y2 441 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SLC47A1Q96FL8 570 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CPXM1Q96SM3 734 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ULBP1Q9BZM6 244 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SERHL2Q9H4I8 314 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SERHLQ9NQF3 203 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GDAP2Q9NXN4 497 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CLCA2Q9UQC9 943 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 ZNF536O15090 1300 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 AIREO43918 545 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 CHRNGP07510 517 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 LINC00032P0C843 101 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 PPP3CCP48454 512 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 GBE1Q04446 702 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 PWP1Q13610 501 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 SPDYE7PQ495Y7 208 aa11.23□□□□□ -0.61
TCOF1-211ENST00000513346 PYDC2Q56P42 97 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms