RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 TSPAN7P41732 249 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 HNRNPH2P55795 449 aaKnown RBP5.34□□□□□ -1.55
CHD1-209ENST00000512844 PDE1BQ01064 536 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 ZNF155Q12901 538 aaPredicted RBP5.34□□□□□ -1.55
CHD1-209ENST00000512844 LRMPQ12912 555 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 DUS1LQ6P1R4 473 aaKnown RBP5.34□□□□□ -1.55
CHD1-209ENST00000512844 DLK2Q6UY11 383 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
CHD1-209ENST00000512844 TMTC3Q6ZXV5 915 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 MAATS1Q7Z4T9 603 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 TMEM116Q8NCL8 245 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 FIG4Q92562 907 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 ORAI1Q96D31 301 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 MMABQ96EY8 250 aaPredicted RBP5.34□□□□□ -1.55
CHD1-209ENST00000512844 FEM1CQ96JP0 617 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 NCAPGQ9BPX3 1015 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 PCDH9Q9HC56 1237 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 ZNF69Q9UC07 566 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 ZNF112Q9UJU3 913 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 FAM237BA0A1B0GVD1 139 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 SRRM3A6NNA2 597 aaPredicted RBP5.33□□□□□ -1.56
CHD1-209ENST00000512844 IFNL4K9M1U5 179 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 SPINT2O43291 252 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 LINC00271P0C7V0 271 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 HOXC9P31274 260 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 PIK3CAP42336 1068 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 ERVFC1-1P60608 527 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 ZBED6P86452 979 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 TFAP4Q01664 338 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 GRIK2Q13002 908 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 KCNT1Q5JUK3 1230 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 DCST1Q5T197 706 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 WBP2NLQ6ICG8 309 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 POC1AQ8NBT0 407 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 DNAAF4Q8WXU2 420 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 SGCDQ92629 289 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 ARHGEF26Q96DR7 871 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 CDCA5Q96FF9 252 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 MTERF1Q99551 399 aaKnown RBP5.33□□□□□ -1.56
CHD1-209ENST00000512844 KRTAP1-5Q9BYS1 174 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 GAREM1Q9H706 876 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 UBTD1Q9HAC8 227 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 TINAGQ9UJW2 476 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 KCNS2Q9ULS6 477 aa5.33□□□□□ -1.56
CHD1-209ENST00000512844 RNASEH2AO75792 299 aaKnown RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 CD4P01730 458 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 ICAM3P32942 547 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 PPARGP37231 505 aaPredicted RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 PBX3P40426 434 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 USP8P40818 1118 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 PRCPP42785 496 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 MAD2L1Q13257 205 aaPredicted RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 KRT32Q14532 448 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 NAB2Q15742 525 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 ZSCAN23Q3MJ62 389 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 GPATCH4Q5T3I0 446 aaKnown RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 FRG2Q64ET8 278 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 HAUS3Q68CZ6 603 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 TTI2Q6NXR4 508 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 TUBA1AQ71U36 451 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 DPPA4Q7L190 304 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 GPR180Q86V85 440 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 RNF113BQ8IZP6 322 aaKnown RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 MAB21L3Q8N8X9 362 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 OR14L1PQ8NHC6 308 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 ARHGEF2Q92974 986 aaKnown RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 MOAP1Q96BY2 351 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 ACOX2Q99424 681 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 CMKLR1Q99788 373 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 C1QTNF5Q9BXJ0 243 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 SH2D4AQ9H788 454 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 RANGRFQ9HD47 186 aaPredicted RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 ACSS1Q9NUB1 689 aaPredicted RBP5.32□□□□□ -1.56
CHD1-209ENST00000512844 C1RLQ9NZP8 487 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 MTMR6Q9Y217 621 aa5.32□□□□□ -1.56
CHD1-209ENST00000512844 PRR23D1E9PI22 279 aaPredicted RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 MID1O15344 667 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 FTCDO95954 541 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 PRR23D2P0DMB1 279 aaPredicted RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 AMD1P17707 334 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 UBA1P22314 1058 aaKnown RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 MCM3P25205 808 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 TERF1P54274 439 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 TROAPQ12815 778 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 SETMARQ53H47 684 aaPredicted RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 HIST2H2BCQ6DN03 193 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 HIST2H2BDQ6DRA6 164 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 TRNP1Q6NT89 227 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 TMEM154Q6P9G4 183 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 NAGSQ8N159 534 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 QRFPRQ96P65 431 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 SIL1Q9H173 461 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 CWC15Q9P013 229 aaKnown RBP5.31□□□□□ -1.56
CHD1-209ENST00000512844 ABI3Q9P2A4 366 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 PADI1Q9ULC6 663 aa5.31□□□□□ -1.56
CHD1-209ENST00000512844 TDRD9Q8NDG6 1382 aaKnown RBP5.3□□□□□ -1.56
CHD1-209ENST00000512844 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
CHD1-209ENST00000512844 TGFB1I1O43294 461 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms