RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TUBD1Q9UJT1 453 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 PCDHGC4Q9Y5F7 938 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ATMQ13315 3056 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 IGHV5-10-1A0A0J9YXX1 117 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
VEGFA-216ENST00000512683 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 PGLSO95336 258 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 FUCA1P04066 466 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TCF4P15884 667 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 IL1R2P27930 398 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
VEGFA-216ENST00000512683 ADCY8P40145 1251 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 ETV5P41161 510 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 FASLGP48023 281 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 CTBSQ01459 385 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TCEA2Q15560 299 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 ARHGAP36Q6ZRI8 547 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 NYAP1Q6ZVC0 841 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TMPRSS9Q7Z410 1059 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 NRSN1Q8IZ57 195 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 TEKT4Q8WW24 435 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 FATE1Q969F0 183 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 NKD1Q969G9 470 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 SH3KBP1Q96B97 665 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 SLC25A18Q9H1K4 315 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 RDH14Q9HBH5 336 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 FOXJ2Q9P0K8 574 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-216ENST00000512683 CAPN11Q9UMQ6 739 aa12.53□□□□□ -0.4
VEGFA-216ENST00000512683 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
VEGFA-216ENST00000512683 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-216ENST00000512683 MAST4O15021 2626 aa12.52□□□□□ -0.4
VEGFA-216ENST00000512683 IGHV1OR21-1A0A087WYE8 117 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 A0A087X0T9 212 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 A8MX80 341 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 ARHGAP6O43182 974 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 FZD6O60353 706 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 FAM228BP0C875 321 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 CCL4P13236 92 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 ETV3P41162 512 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 GPR1P46091 355 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 GNPDA1P46926 289 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 MAZP56270 477 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 RPL26P61254 145 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 ZBED6P86452 979 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 AMZ1Q400G9 498 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 TDRD12Q587J7 1177 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 DCAF12Q5T6F0 453 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 RAET1GQ6H3X3 334 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 Q6ZVL8 140 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 HSD11B1LQ7Z5J1 315 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 NAGSQ8N159 534 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 PELI3Q8N2H9 469 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 AVL9Q8NBF6 648 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 CPLX3Q8WVH0 158 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 CSPG4P5Q96PW8 444 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 SLC12A9Q9BXP2 914 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 EPB41L1Q9H4G0 881 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 RMI1Q9H9A7 625 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 TLN1Q9Y490 2541 aaKnown RBP12.52□□□□□ -0.41
VEGFA-216ENST00000512683 MYO18BQ8IUG5 2567 aa12.52□□□□□ -0.41
VEGFA-216ENST00000512683 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 OR5K4A6NMS3 321 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 PPM1DO15297 605 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 GYPCP04921 128 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 SERPING1P05155 500 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 THRAP10827 490 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 SLC2A4P14672 509 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 CA4P22748 312 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 LHCGRP22888 699 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 AMPD1P23109 780 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 MAP4P27816 1152 aaKnown RBP12.51□□□□□ -0.41
VEGFA-216ENST00000512683 ACTR1BP42025 376 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 MMP13P45452 471 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 ACTR1AP61163 376 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 TPM4P67936 248 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 CRTC2Q53ET0 693 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-216ENST00000512683 PYCR3Q53H96 274 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 BORAQ6PGQ7 559 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 NIPA2Q8N8Q9 360 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 OR10G6Q8NH81 332 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 AP2M1Q96CW1 435 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 CCDC74BQ96LY2 380 aa12.51□□□□□ -0.41
VEGFA-216ENST00000512683 OR2M4Q96R27 311 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms