RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 SYT12Q8IV01 421 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CPSF7Q8N684 471 aaKnown RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 ARL15Q9NXU5 204 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CSPG5O95196 566 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 IFNA6P05013 189 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 FGRP09769 529 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 RFTN1Q14699 578 aaPredicted RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 PTCHD4Q6ZW05 846 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CNTNAP4Q9C0A0 1308 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ERVK-10P10266 1014 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 NUP50Q9UKX7 468 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 AFDNP55196 1824 aaKnown RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 SLC28A2O43868 658 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 PTAR1Q7Z6K3 402 aaPredicted RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 CUZD1Q86UP6 607 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ALG9Q9H6U8 611 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 PIDD1Q9HB75 910 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 EXD2Q9NVH0 621 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CALML5Q9NZT1 146 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 PRR36Q9H6K5 1346 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ANGPTL1O95841 491 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ZCCHC12Q6PEW1 402 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 UBA3Q8TBC4 463 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 FAM151AQ8WW52 585 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 HTRA1Q92743 480 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 RERGLQ9H628 205 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 RPTORQ8N122 1335 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 C17orf102A2RUQ5 167 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CAPN8A6NHC0 703 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ZNF99A8MXY4 864 aaPredicted RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 CCNDBP1O95273 360 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 CD40LGP29965 261 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 TRAM1Q15629 374 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 GCNT6Q5T4J0 391 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 RCN3Q96D15 328 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 LMAN2LQ9H0V9 348 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 FBXO6Q9NRD1 293 aaPredicted RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 PCDHB1Q9Y5F3 818 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
HTT-208ENST00000510626 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CYP20A1Q6UW02 462 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 BEND5Q7L4P6 421 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 GLT6D1Q7Z4J2 308 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 TMC8Q8IU68 726 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 OR5T2Q8NGG2 359 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 UFD1Q92890 307 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CAMK1GQ96NX5 476 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 CST11Q9H112 138 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 SETD4Q9NVD3 440 aa8.36□□□□□ -1.07
HTT-208ENST00000510626 FABP3P05413 133 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 SRSF11Q05519 484 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 USP4Q13107 963 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 BAATQ14032 418 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 CBWD6Q4V339 395 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ESRP1Q6NXG1 681 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 C16orf46Q6P387 395 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 GRIN2DO15399 1336 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CASKO14936 926 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 GSTT2P0CG29 244 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 SPP2Q13103 211 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CBWD3Q5JTY5 395 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CBWD5Q5RIA9 395 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 FN3KQ9H479 309 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 HMGN1P05114 100 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 SPIBQ01892 262 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 PLIN5Q00G26 463 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TIGD4Q8IY51 512 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 PCDH12Q9NPG4 1184 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MAB21L2Q9Y586 359 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TMEM94Q12767 1356 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CDC40O60508 579 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■■■ 30.2
HTT-208ENST00000510626 ACOX1Q15067 660 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CDC42EP5Q6NZY7 148 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 RIOX2Q8IUF8 465 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 KBTBD7Q8WVZ9 684 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 SELENOMQ8WWX9 145 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 SPATA7Q9P0W8 599 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TESMINQ9Y4I5 508 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 OR10H3O60404 316 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 IL1BP01584 269 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CATP04040 527 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 ACSL1P33121 698 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TKTL1P51854 596 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 POLR2JP52435 117 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 SLC5A3P53794 718 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ADAM15Q13444 863 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 KLHDC10Q6PID8 442 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 OR8H3Q8N146 312 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CD93Q9NPY3 652 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 PCDH10Q9P2E7 1040 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms