RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PTCD2Q8WV60 388 aaKnown RBP22.89■■□□□ 1.25
SNF8-209ENST00000510558 CRELD1Q96HD1 420 aa22.89■■□□□ 1.25
SNF8-209ENST00000510558 CEP41Q9BYV8 373 aa22.89■■□□□ 1.25
SNF8-209ENST00000510558 TRNAU1APQ9NX07 287 aaKnown RBP22.89■■□□□ 1.25
SNF8-209ENST00000510558 SLC17A4Q9Y2C5 497 aa22.89■■□□□ 1.25
SNF8-209ENST00000510558 A0A1W2PNU3 283 aaPredicted RBP22.88■■□□□ 1.25
SNF8-209ENST00000510558 CLDN7O95471 211 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 RPLP0P05388 317 aaKnown RBP22.88■■□□□ 1.25
SNF8-209ENST00000510558 IVLP07476 585 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 GLB1P16278 677 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 POLD2P49005 469 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 CCL7P80098 99 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 ILF3Q12906 894 aaKnown RBP eCLIP22.88■■□□□ 1.25
SNF8-209ENST00000510558 QPCTQ16769 361 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 C14orf28Q4W4Y0 310 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 FAM182AQ5T1J6 154 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 CERCAMQ5T4B2 595 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 DOK6Q6PKX4 331 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 NLRP8Q86W28 1048 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 NRROSQ86YC3 692 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 NRSN1Q8IZ57 195 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 KIAA1524Q8TCG1 905 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 GFM1Q96RP9 751 aaKnown RBP22.88■■□□□ 1.25
SNF8-209ENST00000510558 GSDMCQ9BYG8 508 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 ASCL3Q9NQ33 180 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 SEPT10Q9P0V9 454 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 ALG6Q9Y672 507 aa22.88■■□□□ 1.25
SNF8-209ENST00000510558 C1orf232A0A0U1RR37 186 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 A0A1W2PQM1 296 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 PSTPIP1O43586 416 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 LCA5LO95447 670 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 PYGLP06737 847 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 CDKN2BP42772 138 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 CCDC173Q0VFZ6 552 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 HLTFQ14527 1009 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNF8-209ENST00000510558 CCNJLQ8IV13 435 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 RAVER1Q8IY67 606 aaKnown RBP22.87■■□□□ 1.25
SNF8-209ENST00000510558 CCDC170Q8IYT3 715 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 AGAP3Q96P47 875 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 AGAP2Q99490 1192 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 MLPHQ9BV36 600 aaPredicted RBP22.87■■□□□ 1.25
SNF8-209ENST00000510558 RIOK2Q9BVS4 552 aaKnown RBP22.87■■□□□ 1.25
SNF8-209ENST00000510558 BRD8Q9H0E9 1235 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 LRRN3Q9H3W5 708 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 GOLPH3Q9H4A6 298 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 SPATS2LQ9NUQ6 558 aaKnown RBP22.87■■□□□ 1.25
SNF8-209ENST00000510558 APPL1Q9UKG1 709 aa22.87■■□□□ 1.25
SNF8-209ENST00000510558 ANKRD66B4E2M5 251 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 D6RAR5 112 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 AK4P27144 223 aaPredicted RBP22.86■■□□□ 1.25
SNF8-209ENST00000510558 PCBP4P57723 403 aaKnown RBP22.86■■□□□ 1.25
SNF8-209ENST00000510558 ERVPABLB-1P60509 514 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 GALNT3Q14435 633 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 TAZQ16635 292 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 IGF2-ASQ6U949 168 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 B4GALNT4Q76KP1 1039 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 TRIM74Q86UV6 250 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 Q8N9G6 341 aaPredicted RBP22.86■■□□□ 1.25
SNF8-209ENST00000510558 IMP4Q96G21 291 aaKnown RBP22.86■■□□□ 1.25
SNF8-209ENST00000510558 SCARF2Q96GP6 870 aaPredicted RBP22.86■■□□□ 1.25
SNF8-209ENST00000510558 HIC2Q96JB3 615 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 ADGRE3Q9BY15 652 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 THSD1Q9NS62 852 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 TAAR2Q9P1P5 351 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 LRIT1Q9P2V4 623 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 TFR2Q9UP52 801 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 TMEM98Q9Y2Y6 226 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 PCDHGA8Q9Y5G5 932 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 PCDHA13Q9Y5I0 950 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 RNF215Q9Y6U7 377 aa22.86■■□□□ 1.25
SNF8-209ENST00000510558 NBEAQ8NFP9 2946 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 PTPRQQ9UMZ3 2332 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 CCDC187A0A096LP49 1063 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 INPP4BO15327 924 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 PNLIPP16233 465 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 ADCY8P40145 1251 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 CTBSQ01459 385 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 TFDP2Q14188 446 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 SPA17Q15506 151 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 KAZNQ674X7 775 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 SLC30A9Q6PML9 568 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 SPOCD1Q6ZMY3 1216 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 B3GNT8Q7Z7M8 397 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 NT5DC3Q86UY8 548 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 ZNF248Q8NDW4 579 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 EXD1Q8NHP7 514 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 WDR36Q8NI36 951 aaKnown RBP22.85■■□□□ 1.25
SNF8-209ENST00000510558 ZDHHC1Q8WTX9 485 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 PRR11Q96HE9 360 aaPredicted RBP22.85■■□□□ 1.25
SNF8-209ENST00000510558 WDR24Q96S15 920 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 CDH19Q9H159 772 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 SLC25A51Q9H1U9 297 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 ST14Q9Y5Y6 855 aa22.85■■□□□ 1.25
SNF8-209ENST00000510558 PMS2P1A4D2B8 440 aa22.84■■□□□ 1.25
SNF8-209ENST00000510558 NUDT21O43809 227 aaKnown RBP22.84■■□□□ 1.25
SNF8-209ENST00000510558 CST8O60676 142 aa22.84■■□□□ 1.25
SNF8-209ENST00000510558 FGF1P05230 155 aa22.84■■□□□ 1.25
SNF8-209ENST00000510558 RBMS1P29558 406 aaKnown RBP22.84■■□□□ 1.25
SNF8-209ENST00000510558 CYLC1P35663 651 aaPredicted RBP22.84■■□□□ 1.25
SNF8-209ENST00000510558 NR2C2P49116 596 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms