RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 TAGAPQ8N103 731 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 PARP16Q8N5Y8 322 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 NEK9Q8TD19 979 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 ZKSCAN4Q969J2 545 aaPredicted RBP3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 CALML4Q96GE6 196 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 C1orf74Q96LT6 269 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 FUCA2Q9BTY2 467 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 POLDIP3Q9BY77 421 aaKnown RBP3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 NPFFR1Q9GZQ6 430 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 MAP6D1Q9H9H5 199 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 MAGEE1Q9HCI5 957 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 TRNAU1APQ9NX07 287 aaKnown RBP3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 CLIC5Q9NZA1 410 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 ABI3Q9P2A4 366 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 KIF3AQ9Y496 699 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 A3GALT2U3KPV4 340 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 NRXN3Q9Y4C0 1643 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 ADGRL3Q9HAR2 1447 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 ZMYM2Q9UBW7 1377 aa3.25□□□□□ -1.89
CALCOCO2-216ENST00000509784 UTYO14607 1347 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 PTPRCP08575 1304 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 A0A0U1RQG5 324 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TMEM272A0A1B0GTI8 110 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 FAM237AA0A1B0GTK4 181 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 B4DLN1 442 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TAF4O00268 1085 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MDM4O15151 490 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TIMM44O43615 452 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 KLK8O60259 260 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ATG13O75143 517 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ZC3H11AO75152 810 aaKnown RBP eCLIP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CNOT3O75175 753 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 NDUFB8O95169 186 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 IPO7O95373 1038 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ADCY5O95622 1261 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 STARD3NLO95772 234 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MYZAPP0CAP1 466 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CBSLP0DN79 551 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CHRNB2P17787 502 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MCCP23508 829 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 GCH1P30793 250 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 DCTDP32321 178 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SHMT1P34896 483 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CBSP35520 551 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 UBA7P41226 1012 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CDH8P55286 799 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SORDQ00796 357 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 NCBP1Q09161 790 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 NIPAL4Q0D2K0 466 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 OLIG2Q13516 323 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ACVR2BQ13705 512 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TRIP6Q15654 476 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SOWAHAQ2M3V2 549 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TCTN1Q2MV58 587 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TWISTNBQ3B726 338 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MTX3Q5HYI7 312 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 C10orf25Q5T742 122 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MFSD4BQ5TF39 518 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ZNF626Q68DY1 528 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 HIST2H2BCQ6DN03 193 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 HIST2H2BDQ6DRA6 164 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 FBXO46Q6PJ61 603 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SARM1Q6SZW1 724 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SLC16A12Q6ZSM3 486 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CHST9Q7L1S5 443 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 HAPLN4Q86UW8 402 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TICAM2Q86XR7 235 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CCDC13Q8IYE1 715 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 RBFAQ8N0V3 343 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 PDCL2Q8N4E4 241 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 KIAA1524Q8TCG1 905 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TMEM18Q96B42 140 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 FBXL8Q96CD0 374 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ERP27Q96DN0 273 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 GFM1Q96RP9 751 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 WDR77Q9BQA1 342 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MXD3Q9BW11 206 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 MAK16Q9BXY0 300 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 KLHL31Q9H511 634 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 TASP1Q9H6P5 420 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 SMYD2Q9NRG4 433 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ANKEF1Q9NU02 776 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 DECR2Q9NUI1 292 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 ANKRD10Q9NXR5 420 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 PTGFRNQ9P2B2 879 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 HEY2Q9UBP5 337 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 POLG2Q9UHN1 485 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 PYCARDQ9ULZ3 195 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 PCDHA12Q9UN75 941 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 CEP170BQ9Y4F5 1589 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 USP54Q70EL1 1684 aa3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 RIMS1Q86UR5 1692 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-216ENST00000509784 NEO1Q92859 1461 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 MYH15Q9Y2K3 1946 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 A0A0U1RQF3 1178 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 A0A1W2PQ09 198 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 A0A1W2PRG0 241 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 CGB1A6NKQ9 187 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 SMTNL1A8MU46 457 aa3.23□□□□□ -1.89
CALCOCO2-216ENST00000509784 CHL1O00533 1208 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms