RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PDFQ9HBH1 243 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 TAS2R13Q9NYV9 303 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 MOXD2PA6NHM9 499 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 NR5A2O00482 541 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 TLR5O60602 858 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 MTHFD2P13995 350 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 PSMC3P17980 439 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 MYBPC1Q00872 1141 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 MRPL58Q14197 206 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 C6orf10Q5SRN2 563 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 KANK2Q63ZY3 851 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 PRMT9Q6P2P2 845 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 TRPC4APQ8TEL6 797 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 DGCR14Q96DF8 476 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 MYEOVQ96EZ4 313 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 PRICKLE1Q96MT3 831 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 MAGEH1Q9H213 219 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 CCSER2Q9H7U1 834 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 COMMD8Q9NX08 183 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 SEPT3Q9UH03 358 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 RNF112Q9ULX5 631 aa17.89■□□□□ 0.45
CCHCR1-228ENST00000509552 SUPT3HB4E1H0 165 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 H3BMM5 538 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 ANGPT2O15123 496 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 KERAO60938 352 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 SUPT3HO75486 399 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 CSPG5O95196 566 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC10A3P09131 477 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PRKCZQ05513 592 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 RPS6KA2Q15349 733 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 NRF1Q16656 503 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 ALG1LQ6GMV1 187 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 IYDQ6PHW0 289 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 CFAP52Q8N1V2 620 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 FBXO39Q8N4B4 442 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 LINC01599Q8WXQ3 324 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 KIAA1191Q96A73 305 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 TUBGCP3Q96CW5 907 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 COQ10BQ9H8M1 238 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 NLE1Q9NVX2 485 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 MTMR11A4FU01 709 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 LRRC14BA6NHZ5 514 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PPP6CO00743 305 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 CLASP2O75122 1294 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 VPS4BO75351 444 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 CRCPO75575 148 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 LBPP18428 481 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 NME5P56597 212 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 ATP6V0D1P61421 351 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 RAD51Q06609 339 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 FAM219BQ5XKK7 198 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 AFTPHQ6ULP2 937 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 SAPCD2Q86UD0 394 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 SLCO4A1Q96BD0 722 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PPWD1Q96BP3 646 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 RMDN1Q96DB5 314 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 TRIB3Q96RU7 358 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PRPF18Q99633 342 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 MGME1Q9BQP7 344 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC39A3Q9BRY0 314 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 TRIM15Q9C019 465 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 DERL2Q9GZP9 239 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PCDHGB4Q9UN71 923 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 PCDHGB5Q9Y5G0 923 aa17.88■□□□□ 0.45
CCHCR1-228ENST00000509552 A0A0D9SEW6 157 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 NDUFS3O75489 264 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 TFAP2AP05549 437 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 ETS2P15036 469 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 EEF1DP29692 281 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 FMO4P31512 558 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 GNA12Q03113 381 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 CLCQ05315 142 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 LCP2Q13094 533 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 GK3PQ14409 553 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 IRAK1BP1Q5VVH5 260 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 RNF180Q86T96 592 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 OR2T34Q8NGX1 318 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 OR2T3Q8NH03 318 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 DDI1Q8WTU0 396 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 B3GALT6Q96L58 329 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 ZNF597Q96LX8 424 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 NSUN5Q96P11 429 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 OSBPL11Q9BXB4 747 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 GID8Q9NWU2 228 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 FAM50BQ9Y247 325 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 FRMPD3Q5JV73 1810 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 SYCE1LA8MT33 242 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 CA12O43570 354 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 KCNQ1P51787 676 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 FOXA1P55317 472 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 GPR17Q13304 367 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 IKBKEQ14164 716 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC5A9Q2M3M2 681 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 ANKS6Q68DC2 871 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 PAQR3Q6TCH7 311 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 ISLR2Q6UXK2 745 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms