RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 EVA1BQ9NVM1 165 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SHOC2Q9UQ13 582 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SLCO1B1Q9Y6L6 691 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 LRRK1Q38SD2 2015 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 CFAP54Q96N23 3096 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 CABIN1Q9Y6J0 2220 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 A0A1B0GTQ1 180 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 GPR89AB7ZAQ6 455 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 H0Y8X5 98 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 CDX4O14627 284 aaPredicted RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 TNFRSF10CO14798 259 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 ZNF185O15231 689 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 STX7O15400 261 aaKnown RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 SUN1O94901 812 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 RASGRP1O95267 797 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 METTL18O95568 372 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 AGTP01019 485 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 SLC4A1P02730 911 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 C1SP09871 688 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 GPR89BP0CG08 455 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 ALPPL2P10696 532 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 PPARDQ03181 441 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 CKAP4Q07065 602 aaKnown RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 ITGA9Q13797 1035 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 PUM1Q14671 1186 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP54-207ENST00000508583 CDKN3Q16667 212 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 UAP1L1Q3KQV9 507 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 HENMT1Q5T8I9 393 aaKnown RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 LAYNQ6UX15 382 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 SYT10Q6XYQ8 523 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 PCGF5Q86SE9 256 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 SDR16C5Q8N3Y7 309 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 DTX3LQ8TDB6 740 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 SLCO2A1Q92959 643 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 CAPZA3Q96KX2 299 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 C16orf45Q96MC5 204 aaPredicted RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 GORASP1Q9BQQ3 440 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 DUSP23Q9BVJ7 150 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 SPATA16Q9BXB7 569 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 FSCN3Q9NQT6 498 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 MBNL1Q9NR56 388 aaKnown RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 RXFP3Q9NSD7 469 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 DNAJC28Q9NX36 388 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 KLQ9UEF7 1012 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 PCYOX1Q9UHG3 505 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 APPL1Q9UKG1 709 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 CA5BQ9Y2D0 317 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 OR1A2Q9Y585 309 aa9.11□□□□□ -0.95
NUP54-207ENST00000508583 TP53BP1Q12888 1972 aaPredicted RBP9.11□□□□□ -0.95
NUP54-207ENST00000508583 ADAMTS9Q9P2N4 1935 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 KRT14P02533 472 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CSF2P04141 144 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 PIRTP0C851 137 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 NME1P15531 152 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 JUNDP17535 347 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 TPSB2P20231 275 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 RPL22P35268 128 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 SPAM1P38567 509 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 GRK6P43250 576 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CHRNA4P43681 627 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 KCNJ1P48048 391 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CDK3Q00526 305 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 BNC1Q01954 994 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 GPS1Q13098 491 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 DHX34Q14147 1143 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 FZD2Q14332 565 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 ELOCQ15369 112 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 TPSAB1Q15661 275 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 RSPO4Q2I0M5 234 aaPredicted RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 FAM182AQ5T1J6 154 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 ENPP7Q6UWV6 458 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 NLRP9Q7RTR0 991 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CREG2Q8IUH2 290 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 PHYKPLQ8IUZ5 450 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 SLC22A18ASQ8N1D0 253 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 FSTL5Q8N475 847 aaPredicted RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 TRAM1L1Q8N609 369 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 OR56A4Q8NGH8 313 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 SCG3Q8WXD2 468 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 PEX13Q92968 403 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 HIC2Q96JB3 615 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CDC6Q99741 560 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 APOL2Q9BQE5 337 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 RIOK2Q9BVS4 552 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 TEX101Q9BY14 249 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 ZCCHC2Q9C0B9 1178 aaKnown RBP9.1□□□□□ -0.95
NUP54-207ENST00000508583 ABCG8Q9H221 673 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 RMI1Q9H9A7 625 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 NCKIPSDQ9NZQ3 722 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 SPASTQ9UBP0 616 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 CD84Q9UIB8 345 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 FNDC3AQ9Y2H6 1198 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms