RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SCAMP4Q969E2 229 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TDRD1Q9BXT4 1180 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GOLGA6AQ9NYA3 693 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TAAR2Q9P1P5 351 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ACSL6Q9UKU0 697 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 LOXL2Q9Y4K0 774 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 BOD1L1Q8NFC6 3051 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 CAPN8A6NHC0 703 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 K7ENP7 123 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 MATN3O15232 486 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 FGF1P05230 155 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 IVLP07476 585 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 ZNF30P17039 623 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 CCNCP24863 283 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 MAN1A1P33908 653 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 GPR1P46091 355 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 POLD2P49005 469 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 STC1P52823 247 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 B4GALNT1Q00973 533 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 CTBSQ01459 385 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 RHDQ02161 417 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 GBE1Q04446 702 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 NR1D2Q14995 579 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 PDK2Q15119 407 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 IFI16Q16666 785 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 INO80CQ6PI98 192 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 DOK6Q6PKX4 331 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 SLC30A9Q6PML9 568 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 ZNF765Q7L2R6 523 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 TRIM74Q86UV6 250 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 KCTD6Q8NC69 237 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 PATE1Q8WXA2 126 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 CTNNBL1Q8WYA6 563 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 AP2M1Q96CW1 435 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 SCARF2Q96GP6 870 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 ABCG8Q9H221 673 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 PISDQ9UG56 409 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 CD84Q9UIB8 345 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 TTLL3Q9Y4R7 772 aa12.96□□□□□ -0.33
HMGCS1-205ENST00000508319 TENM4Q6N022 2769 aa12.96□□□□□ -0.34
HMGCS1-205ENST00000508319 B4GAT1O43505 415 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 JMJD7P0C870 316 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 KRT10P13645 584 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 ITIH1P19827 911 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 ADCY8P40145 1251 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 PTSQ03393 145 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 C19orf57Q0VDD7 668 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 ZSCAN23Q3MJ62 389 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 NAGSQ8N159 534 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 NDUFAF2Q8N183 169 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 ZNF843Q8N446 348 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 RAPGEF5Q92565 580 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 TTC9Q92623 222 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 COX14Q96I36 57 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 AGAP2Q99490 1192 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 CDH19Q9H159 772 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 SEMA6CQ9H3T2 930 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 RDH14Q9HBH5 336 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.341e-10■■■■■ 28.9
HMGCS1-205ENST00000508319 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 CHKBQ9Y259 395 aa12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 SETXQ7Z333 2677 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-205ENST00000508319 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 AGRPO00253 132 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 NVLO15381 856 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 ECEL1O95672 775 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 CPNE6O95741 557 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 KRT7P08729 469 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 TMEM253P0C7T8 217 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 MX2P20592 715 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 CES1P23141 567 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 ETV5P41161 510 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 EPHB1P54762 984 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 TAF1BQ53T94 588 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 MAP7D3Q8IWC1 876 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 CCDC13Q8IYE1 715 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 NRSN1Q8IZ57 195 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 PLD5Q8N7P1 536 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 WBP1Q96G27 269 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 OR2M4Q96R27 311 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms