RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 XPR1Q9UBH6 696 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 RAD51BO15315 384 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 CCNKO75909 580 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 RASAL1O95294 804 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 ANK1P16157 1881 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
DDR1-262ENST00000508312 HTR1BP28222 390 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 ARL4AP40617 200 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 LEPRP48357 1165 aaKnown RBP12.69□□□□□ -0.38
DDR1-262ENST00000508312 LIMK2P53671 638 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
DDR1-262ENST00000508312 ATP6AP1Q15904 470 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 CCL14Q16627 93 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 OSTM1Q86WC4 334 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 GATAD2AQ86YP4 633 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 ARNTL2Q8WYA1 636 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 SDCCAG3Q96C92 435 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 HDAC11Q96DB2 347 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 ATXN3LQ9H3M9 355 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 TRIM39Q9HCM9 518 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 AKIP1Q9NQ31 210 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
DDR1-262ENST00000508312 TMEM30AQ9NV96 361 aa12.69□□□□□ -0.38
DDR1-262ENST00000508312 ZSCAN5BA6NJL1 495 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 I6L893 689 aaPredicted RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 M0QYT0 321 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 TBX1O43435 398 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 DDHD2O94830 711 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 SEC24AO95486 1093 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 MPOP05164 745 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CASP2P42575 452 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 MAGEA6P43360 314 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 TNFAIP2Q03169 654 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 INCA1Q0VD86 236 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 DGCR6Q14129 220 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CERCAMQ5T4B2 595 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 C9orf57Q5W0N0 161 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 STEAP4Q687X5 459 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 NCBP2-AS2Q69YL0 99 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 COLGALT2Q8IYK4 626 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FIG4Q92562 907 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 ZFYVE19Q96K21 471 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 CDK5RAP1Q96SZ6 601 aaKnown RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 MED10Q9BTT4 135 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 SLC25A23Q9BV35 468 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CD300AQ9UGN4 299 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 PTPRFP10586 1907 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 SMIM28A0A1B0GU29 152 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 NEMP2A6NFY4 417 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 GAS2O43903 313 aaKnown RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 ABCB7O75027 752 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 MMP3P08254 477 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 SHMT2P34897 504 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 PLK1P53350 603 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 STX1BP61266 288 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CCL15Q16663 113 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 ZYG11AQ6WRX3 759 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 GPRIN1Q7Z2K8 1008 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 PAGE2Q7Z2X7 111 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 LRRC49Q8IUZ0 686 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 LSMEM2Q8N112 164 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 ANKRD52Q8NB46 1076 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 NDNFQ8TB73 568 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 PNPT1Q8TCS8 783 aaKnown RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 MAGED4Q96JG8 741 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 PNMA8BQ9ULN7 279 aaPredicted RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 RAD54BQ9Y620 910 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 DOCK3Q8IZD9 2030 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 TRIM64BA6NI03 449 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 RFPL2O75678 378 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 INMTO95050 263 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 GSNP06396 782 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 TSPAN8P19075 237 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 CXCR2P25025 360 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 VBP1P61758 197 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 POU5F1BQ06416 359 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FUT11Q495W5 492 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 ZNF484Q5JVG2 852 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FBXO47Q5MNV8 452 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FAAH2Q6GMR7 532 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FSTL5Q8N475 847 aaPredicted RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 PSD4Q8NDX1 1056 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 VPS39Q96JC1 886 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 FBRSL1Q9HCM7 1045 aaKnown RBP12.68□□□□□ -0.38
DDR1-262ENST00000508312 PCDHGA11Q9Y5H2 935 aa12.68□□□□□ -0.38
DDR1-262ENST00000508312 TRIM64A6NGJ6 449 aa12.67□□□□□ -0.38
DDR1-262ENST00000508312 NME4O00746 187 aa12.67□□□□□ -0.38
DDR1-262ENST00000508312 DLX3O60479 287 aa12.67□□□□□ -0.38
DDR1-262ENST00000508312 ENDOD1O94919 500 aa12.67□□□□□ -0.38
DDR1-262ENST00000508312 FYNP06241 537 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms