RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HRH4Q9H3N8 390 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 MVB12BQ9H7P6 319 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 ERVMER34-1Q9H9K5 563 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 SETD4Q9NVD3 440 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 ANKRD10Q9NXR5 420 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 PSD3Q9NYI0 1048 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 R3HDM2Q9Y2K5 976 aaKnown RBP3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 INSL6Q9Y581 213 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 CEPT1Q9Y6K0 416 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 A3GALT2U3KPV4 340 aa3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-205ENST00000506426 SPHKAPQ2M3C7 1700 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 NHSL1Q5SYE7 1610 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 WDR17Q8IZU2 1322 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 A0A0U1RQF3 1178 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 A8MXE2 369 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 KLK8O60259 260 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 RAMP2O60895 175 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MITFO75030 526 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 TBX10O75333 385 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 PROP1O75360 226 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 AVILO75366 819 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 DAB1O75553 588 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HIST1H2ABP04908 130 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ABCB1P08183 1280 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HSP90AB1P08238 724 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MMP2P08253 660 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 QDPRP09417 244 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 SCG2P13521 617 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 KRT4P19013 534 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HIST1H2ADP20671 130 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 TNFSF8P32971 234 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CXCR3P49682 368 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CLCN3P51790 818 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HMGA2P52926 109 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 RPS13P62277 151 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 SORDQ00796 357 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 GHRHRQ02643 423 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 NAE1Q13564 534 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CAPSQ13938 189 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 SOWAHAQ2M3V2 549 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ESCO2Q56NI9 601 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 C9orf152Q5JTZ5 239 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF362Q5T0B9 420 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 KRT80Q6KB66 452 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MIS18BP1Q6P0N0 1132 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 FBXO46Q6PJ61 603 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CFAP77Q6ZQR2 320 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HIST3H2AQ7L7L0 130 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 LINGO2Q7L985 606 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 NOXA1Q86UR1 476 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HAPLN4Q86UW8 402 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 KBTBD6Q86V97 674 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CAMK1DQ8IU85 385 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 WDR63Q8IWG1 891 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM217AQ8IXS0 508 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCDC13Q8IYE1 715 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 Q8N1X5 172 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MINDY1Q8N5J2 469 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HORMAD2Q8N7B1 307 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 TDRD5Q8NAT2 981 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MCUQ8NE86 351 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 BEST2Q8NFU1 509 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 SEMA6DQ8NFY4 1073 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 HUS1BQ8NHY5 278 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 NSMCE1Q8WV22 266 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 LRRC59Q96AG4 307 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 PGAP3Q96FM1 320 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 VCPIP1Q96JH7 1222 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF570Q96NI8 536 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM118BQ9BPY3 351 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ADPGKQ9BRR6 497 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 EDEM3Q9BZQ6 932 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 B3GNT4Q9C0J1 378 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 AAMDCQ9H7C9 122 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZWILCHQ9H900 591 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 SPAG4Q9NPE6 437 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MRGBPQ9NV56 204 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 TMEM45AQ9NWC5 275 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 STK26Q9P289 416 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 AGO2Q9UKV8 859 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 EXO1Q9UQ84 846 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 ERVK-11Q9UQG0 969 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 CMAHPQ9Y471 501 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
TRAPPC11-205ENST00000506426 MYOM2P54296 1465 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PXDNQ92626 1479 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CDK12Q9NYV4 1490 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 RRBP1Q9P2E9 1410 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 ADAMDEC1O15204 470 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PAPSS1O43252 624 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 JRKO75564 520 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 GGPS1O95749 300 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 TPOP07202 933 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 VDRP11473 427 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 TACR2P21452 398 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms