RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PRRT3Q5FWE3 981 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 SIRPB2Q5JXA9 342 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 FAM182AQ5T1J6 154 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 RBFAQ8N0V3 343 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 SLC25A45Q8N413 288 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 LMX1AQ8TE12 382 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 ATG4AQ8WYN0 398 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 RTP4Q96DX8 246 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 LRRC61Q9BV99 259 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 FICDQ9BVA6 458 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 FAM83DQ9H4H8 585 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 UCKL1Q9NWZ5 548 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 NFKBIL1Q9UBC1 381 aaPredicted RBP16.63■□□□□ 0.25
SNCA-209ENST00000506244 FEZ2Q9UHY8 353 aaPredicted RBP16.63■□□□□ 0.25
SNCA-209ENST00000506244 SHOC2Q9UQ13 582 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 A0A0U1RQS6 177 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 TPP1O14773 563 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 TNFP01375 233 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 FGGP02679 453 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 ANXA6P08133 673 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 PIRTP0C851 137 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 CDK4P11802 303 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 PARP6Q2NL67 630 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 HENMT1Q5T8I9 393 aaKnown RBP16.62■□□□□ 0.25
SNCA-209ENST00000506244 ZDHHC20Q5W0Z9 365 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 ZCCHC8Q6NZY4 707 aaKnown RBP16.62■□□□□ 0.25
SNCA-209ENST00000506244 GLT6D1Q7Z4J2 308 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 SLC25A41Q8N5S1 370 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 SCG3Q8WXD2 468 aaKnown RBP16.62■□□□□ 0.25
SNCA-209ENST00000506244 GLMNQ92990 594 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 SCAMP4Q969E2 229 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 PDXPQ96GD0 296 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 ZSCAN5AQ9BUG6 496 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 RIOK2Q9BVS4 552 aaKnown RBP16.62■□□□□ 0.25
SNCA-209ENST00000506244 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 HOMER3Q9NSC5 361 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 KLF15Q9UIH9 416 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 DOLKQ9UPQ8 538 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 ZNF148Q9UQR1 794 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 LRP4O75096 1905 aa16.62■□□□□ 0.25
SNCA-209ENST00000506244 PRSS38A1L453 326 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 TMEM202A6NGA9 273 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 LMO7DNF2Z398 122 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PSMD3O43242 534 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 SIGLEC6O43699 453 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 CEP104O60308 925 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PPFIA2O75334 1257 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 CKMT2P17540 419 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PMLP29590 882 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 DAB2P98082 770 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 OASLQ15646 514 aaKnown RBP16.61■□□□□ 0.25
SNCA-209ENST00000506244 CCNG2Q16589 344 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 ZNF569Q5MCW4 686 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 RD3Q7Z3Z2 195 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 TMC3Q7Z5M5 1100 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 GKN2Q86XP6 184 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PELI3Q8N2H9 469 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 CCDC89Q8N998 374 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 FAM181AQ8N9Y4 354 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 BLOC1S5Q8TDH9 187 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 TSACCQ96A04 125 aaPredicted RBP16.61■□□□□ 0.25
SNCA-209ENST00000506244 HIC2Q96JB3 615 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PBKQ96KB5 322 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PLEKHG4BQ96PX9 1271 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 NAP1L3Q99457 506 aaPredicted RBP16.61■□□□□ 0.25
SNCA-209ENST00000506244 TBL1YQ9BQ87 522 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 GORASP1Q9BQQ3 440 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 LGR4Q9BXB1 951 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 FRMD8Q9BZ67 464 aaPredicted RBP16.61■□□□□ 0.25
SNCA-209ENST00000506244 LRRC40Q9H9A6 602 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 MOSPD1Q9UJG1 213 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 PCDHGA1Q9Y5H4 931 aa16.61■□□□□ 0.25
SNCA-209ENST00000506244 TRIM38O00635 465 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 RFPL3O75679 317 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 SOD1P00441 154 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 HMGCLP35914 325 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 CHRNA4P43681 627 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 RPIAP49247 311 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 DUSP3P51452 185 aaPredicted RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 GDF10P55107 478 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 FOXC1Q12948 553 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 ILKQ13418 452 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 PROX2Q3B8N5 592 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 DRICH1Q6PGQ1 229 aaPredicted RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 LVRNQ6Q4G3 990 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 RFLNAQ6ZTI6 216 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 KLHDC8BQ8IXV7 354 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 TRAM1L1Q8N609 369 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 ADAMTS14Q8WXS8 1223 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 OR1E3Q8WZA6 343 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 TCEAL2Q9H3H9 227 aaPredicted RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 CYP4F12Q9HCS2 524 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 TRMT1Q9NXH9 659 aaKnown RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNCA-209ENST00000506244 ANGPTL2Q9UKU9 493 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms