RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 FAM153AQ9UHL3 310 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BAIAP2L1Q9UHR4 511 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 POLR2AP24928 1970 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TADA2AO75478 443 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GPX5O75715 221 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ALBP02768 609 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SHBGP04278 402 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 HOXC6P09630 235 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RHCEP18577 417 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CTSKP43235 329 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 HERVK_113P62684 666 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RHDQ02161 417 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 UGT8Q16880 541 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NADK2Q4G0N4 442 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MCMDC2Q4G0Z9 681 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RILPL1Q5EBL4 403 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BRMS1LQ5PSV4 323 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 WDR59Q6PJI9 974 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TMTC3Q6ZXV5 915 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SATL1Q86VE3 508 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NLRP8Q86W28 1048 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RHPN2Q8IUC4 686 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 C7orf61Q8IZ16 206 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ADGRF4Q8IZF3 695 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ABRAQ8N0Z2 381 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ETNPPLQ8TBG4 499 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 APOPT1Q96IL0 206 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CLPTM1LQ96KA5 538 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CMTM3Q96MX0 182 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MNTQ99583 582 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ECSITQ9BQ95 431 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SYT17Q9BSW7 474 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MYL10Q9BUA6 226 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CADM1Q9BY67 442 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NARFLQ9H6Q4 476 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ZDHHC18Q9NUE0 388 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SPATA6Q9NWH7 488 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MKLN1Q9UL63 735 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CLEC4AQ9UMR7 237 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PLAAQ9Y263 795 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 IGKV6-21A0A0C4DH24 114 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GOLGA8JA6NMD2 632 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EFCAB7A8K855 629 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SYCE1LA8MT33 242 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 H3BNX3 289 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NPC1O15118 1278 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CASC3O15234 703 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SIAH2O43255 324 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KLRC4O43908 158 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MFAP3LO75121 409 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 COX5BP10606 129 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 POU2F1P14859 743 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PBLDP30039 288 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 STAT1P42224 750 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CCR3P51677 355 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ERVFC1P60507 584 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ACTR3P61158 418 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PHC1P78364 1004 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NFIAQ12857 509 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SMAD4Q13485 552 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PPA1Q15181 289 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KRTCAP3Q53RY4 240 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PITRM1Q5JRX3 1037 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TMEM65Q6PI78 240 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 OR2C3Q8N628 320 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ARFGAP2Q8N6H7 521 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 OR52N1Q8NH53 320 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 LNX1Q8TBB1 728 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 UBA3Q8TBC4 463 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MCOLN3Q8TDD5 553 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SYTL4Q96C24 671 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ZBTB45Q96K62 511 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NLRP4Q96MN2 994 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KRT12Q99456 494 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NUP85Q9BW27 656 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NDEL1Q9GZM8 345 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TM9SF3Q9HD45 589 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GPRC5DQ9NZD1 345 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TBC1D29Q9UFV1 150 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NIP7Q9Y221 180 aaKnown RBP eCLIP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NYNRINQ9P2P1 1898 aaKnown RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ZSCAN5BA6NJL1 495 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 A8MX80 341 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ALG1L2C9J202 215 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 K7ENM7 598 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 DVL2O14641 736 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 MEIS2O14770 477 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 DNPH1O43598 174 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 HCRTR2O43614 444 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 PSMG1O95456 288 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 PLGP00747 810 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 SBK3P0C264 359 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 ETS2P15036 469 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 PTPRAP18433 802 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 CCNA2P20248 432 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 LPOP22079 712 aaPredicted RBP2.28□□□□□ -2.05
NEDD4-205ENST00000506154 UGT1A3P35503 534 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 EPS15P42566 896 aa2.28□□□□□ -2.05
NEDD4-205ENST00000506154 NLRP11P59045 1033 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms