RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 NUSAP1Q9BXS6 441 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 GPR63Q9BZJ6 419 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 POLR3BQ9NW08 1133 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF106Q9H2Y7 1883 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 AURKAO14965 403 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 HTRA2O43464 458 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CXCL14O95715 111 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 FGBP02675 491 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 FGF4P08620 206 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 HNRNPA1P09651 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 HSPA1AP0DMV8 641 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 HSPA1BP0DMV9 641 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 MC4RP32245 332 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 BTKQ06187 659 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF678Q5SXM1 525 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 FAM117BQ6P1L5 589 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PPFIBP2Q8ND30 876 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PDLIM5Q96HC4 596 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF385DQ9H6B1 395 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ALG9Q9H6U8 611 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 TMEM45AQ9NWC5 275 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 STX18Q9P2W9 335 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZDHHC2Q9UIJ5 367 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PIK3R1P27986 724 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 CPOXP36551 454 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 AP2B1P63010 937 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 TXNDC8Q6A555 127 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 VCX3BQ9H321 246 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 IL17CQ9P0M4 197 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 KLHL42Q9P2K6 505 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 SLC25A13Q9UJS0 675 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 E9PBE3 544 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 DCXO43602 365 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 KLHL41O60662 606 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 CD160O95971 181 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 ACTR3P61158 418 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 STX5Q13190 355 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 METTL2BQ6P1Q9 378 aaKnown RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 ADGRG6Q86SQ4 1221 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 MDGA1Q8NFP4 955 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 UTP6Q9NYH9 597 aaKnown RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 TRIM43BA6NCK2 446 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 A8MUI8 341 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PRMT5O14744 637 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 SLC9A3R1O14745 358 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 GRM6O15303 877 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 SNAP91O60641 907 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 XYLBO75191 536 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PSMG1O95456 288 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 MLYCDO95822 493 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 SLC4A1P02730 911 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 MZF1P28698 734 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 RGS4P49798 205 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 IL2P60568 153 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PLEKHG6Q3KR16 790 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PDE12Q6L8Q7 609 aaKnown RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 GAREM2Q75VX8 874 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 RNF135Q8IUD6 432 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 RBFAQ8N0V3 343 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 PCDH20Q8N6Y1 951 aaKnown RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 KYQ8NBH2 561 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 TRIM43Q96BQ3 446 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-205ENST00000505458 CYP2S1Q96SQ9 504 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 RAD9AQ99638 391 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 THTPAQ9BU02 230 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 NUF2Q9BZD4 464 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 GSTO2Q9H4Y5 243 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 GNPTGQ9UJJ9 305 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
NFKB1-205ENST00000505458 TTC24A2A3L6 582 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-205ENST00000505458 OR51F1A6NGY5 319 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 ANP32DO95626 131 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 CA8P35219 290 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 STX1BP61266 288 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 NXNQ6DKJ4 435 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 CHSY3Q70JA7 882 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 ADAMTSL2Q86TH1 951 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 EXOC2Q96KP1 924 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 ATOH8Q96SQ7 321 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 SLC2A11Q9BYW1 496 aa11.28□□□□□ -0.6
NFKB1-205ENST00000505458 SUDS3Q9H7L9 328 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-205ENST00000505458 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms