RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 GPC4O75487 556 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 RENBPP51606 427 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 NDST2P52849 883 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 CDKN2DP55273 166 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 RALGDSQ12967 914 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 SAMD4BQ5PRF9 694 aaKnown RBP16.93■□□□□ 0.3
LIN54-204ENST00000505397 PIK3R6Q5UE93 754 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 B3GNT6Q6ZMB0 384 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 FUNDC1Q8IVP5 155 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 MPP4Q96JB8 637 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 CWH43Q9H720 699 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 COMMD8Q9NX08 183 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 CROTQ9UKG9 612 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 MIA3Q5JRA6 1907 aa16.93■□□□□ 0.3
LIN54-204ENST00000505397 MYOCOSA0A1B0GUC4 107 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 PDLIM1O00151 329 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 PSMC3P17980 439 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 NR1H2P55055 460 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 ADRM1Q16186 407 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIN54-204ENST00000505397 UNC50Q53HI1 259 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 C10orf120Q5SQS8 335 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 CARM1Q86X55 608 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 PNPLA1Q8N8W4 532 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 OSBPL11Q9BXB4 747 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 PRDM5Q9NQX1 630 aaPredicted RBP16.92■□□□□ 0.3
LIN54-204ENST00000505397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIN54-204ENST00000505397 ASLP04424 464 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 SLC8B1Q6J4K2 584 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 HMBOX1Q6NT76 420 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 HERC6Q8IVU3 1022 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 TEX26Q8N6G2 289 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 GIPC2Q8TF65 315 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 ROPN1LQ96C74 230 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 SLC39A13Q96H72 371 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 SEMA6AQ9H2E6 1030 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 LTBP2Q14767 1821 aa16.92■□□□□ 0.3
LIN54-204ENST00000505397 ABHD14A-ACY1A0A1B0GW23 586 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 VNN2O95498 520 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 ALDOCP09972 364 aaKnown RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 ATP6V1B1P15313 513 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 GPX3P22352 226 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 OR1D2P34982 312 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 CD86P42081 329 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 ARSDP51689 593 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 SLC10A7Q0GE19 358 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 NRF1Q16656 503 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 GPR158Q5T848 1215 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 CLEC6AQ6EIG7 209 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 PTAR1Q7Z6K3 402 aaPredicted RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 ATP6V0D2Q8N8Y2 350 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 OR9I1Q8NGQ6 314 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 C3orf30Q96M34 536 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 GPATCH1Q9BRR8 931 aaKnown RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 C11orf49Q9H6J7 331 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 NT5MQ9NPB1 228 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 POLR3BQ9NW08 1133 aaPredicted RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 MARCH2Q9P0N8 246 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 J3KR12 359 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 RPL17P18621 184 aaKnown RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 HERVK_113P63132 956 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 PABPC1LQ4VXU2 614 aaKnown RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 SH3RF2Q8TEC5 729 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 ERVK-6Q9BXR3 956 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 MARCH4Q9P2E8 410 aaPredicted RBP16.91■□□□□ 0.3
LIN54-204ENST00000505397 BACE2Q9Y5Z0 518 aa16.91■□□□□ 0.3
LIN54-204ENST00000505397 FGF4P08620 206 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 TUFMP49411 452 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.39e-7■■■■□ 23.8
LIN54-204ENST00000505397 ACVR1Q04771 509 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 BIRC2Q13490 618 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 FAM219BQ5XKK7 198 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 PTERQ96BW5 349 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 C19orf60Q96EN9 201 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 HMCESQ96FZ2 354 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ZNF558Q96NG5 402 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SLC29A1Q99808 456 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ARMC1Q9NVT9 282 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 AK5Q9Y6K8 562 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 LOC285095A0A1B0GVY8 99 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 LDB2O43679 373 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SUPT7LO94864 414 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 CSPG5O95196 566 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 RHOQP17081 205 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 FDXRP22570 491 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 GJA8P48165 433 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 MAXP61244 160 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 TRIP4Q15650 581 aaPredicted RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 MTX3Q5HYI7 312 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 MARC1Q5VT66 337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms