RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 STRADAQ7RTN6 431 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC34A3Q8N130 599 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 SFRP1Q8N474 314 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 CCDC185Q8N715 623 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 RXFP2Q8WXD0 754 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 SH3KBP1Q96B97 665 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 TCTN2Q96GX1 697 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 TRIM55Q9BYV6 548 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 CATSPERBQ9H7T0 1116 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 PDFQ9HBH1 243 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 SIDT1Q9NXL6 827 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 GOLGA6AQ9NYA3 693 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 PCDHGA9Q9Y5G4 932 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 PCDHGA6Q9Y5G7 932 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 PPP1R3GB7ZBB8 358 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 LRCH4O75427 683 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 PON1P27169 355 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 TEAD1P28347 426 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 CASP14P31944 242 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 RGRP47804 291 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 DENND2CQ68D51 928 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 RAET1GQ6H3X3 334 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 DOK6Q6PKX4 331 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 CREBRFQ8IUR6 639 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 RASGRP3Q8IV61 690 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 FAM71AQ8IYT1 594 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 UMODL1-AS1Q8N2C9 162 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 TSEN2Q8NCE0 465 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 SEC14L1Q92503 715 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 NTAN1Q96AB6 310 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 RNF31Q96EP0 1072 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 C5orf34Q96MH7 638 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 SLAMF7Q9NQ25 335 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 B4GALT6Q9UBX8 382 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 MAN1B1Q9UKM7 699 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 ATP6V1DQ9Y5K8 247 aa15.73■□□□□ 0.11
PDLIM7-210ENST00000503827 GTPBP10A4D1E9 387 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 J3KR12 359 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 NDUFA10O95299 355 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 ANKRD34CP0C6C1 535 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 CYP11B1P15538 503 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 EPHA4P54764 986 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 NFATC2Q13469 925 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 DNASE1L3Q13609 305 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 LRP8Q14114 963 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 NAA30Q147X3 362 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 CNGA3Q16281 694 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 PRR30Q53SZ7 412 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 SLFN11Q7Z7L1 901 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 PLXDC1Q8IUK5 500 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 PYROXD2Q8N2H3 581 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 TTC13Q8NBP0 860 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 GPT2Q8TD30 523 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 PDCD6IPQ8WUM4 868 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 CPA5Q8WXQ8 436 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 THAP4Q8WY91 577 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 DTD2Q96FN9 168 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 SCARF2Q96GP6 870 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 EPB41L1Q9H4G0 881 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 GDPD2Q9HCC8 539 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 MLXIPLQ9NP71 852 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 SARS2Q9NP81 518 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 ACSS2Q9NR19 701 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 PADI1Q9ULC6 663 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC5A6Q9Y289 635 aa15.72■□□□□ 0.11
PDLIM7-210ENST00000503827 CREB3O43889 395 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 PRAMEF11O60813 436 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 PALMO75781 387 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 MT-ND3P03897 115 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 NFKBIAP25963 317 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 ETV3P41162 512 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 GARSP41250 739 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 PTPN9P43378 593 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 HDAC4P56524 1084 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 PAK1Q13153 545 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 IL11RAQ14626 422 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 PYCR3Q53H96 274 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC9B2Q86UD5 537 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 LZTR1Q8N653 840 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 FAM172AQ8WUF8 416 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 CENPIQ92674 756 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 OR6C1Q96RD1 312 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 CINPQ9BW66 212 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 SIX2Q9NPC8 291 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 ZNF451Q9Y4E5 1061 aa15.71■□□□□ 0.11
PDLIM7-210ENST00000503827 C2CD4BA6NLJ0 364 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 C21orf140B9A014 251 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 TRAFD1O14545 582 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 DPM1O60762 260 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 HEXIM1O94992 359 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 VIPR1P32241 457 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 GPR1P46091 355 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 CCL11P51671 97 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms