RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TIGD2Q4W5G0 525 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SERPINA13PQ6UXR4 307 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 RBFAQ8N0V3 343 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 DQX1Q8TE96 717 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 OR52E6Q96RD3 313 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 PANX1Q96RD7 426 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SPATA5L1Q9BVQ7 753 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC39A8Q9C0K1 460 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 PSME2Q9UL46 239 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SPATA2Q9UM82 520 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 GRM3Q14832 879 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 C11orf88Q6PI97 169 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 KIAA0408Q6ZU52 694 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 NPAS4Q8IUM7 802 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 WDR48Q8TAF3 677 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 GMIPQ9P107 970 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SAMHD1Q9Y3Z3 626 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 CAPN8A6NHC0 703 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 UBXN8O00124 270 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 PPIBP23284 216 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 ADSLP30566 484 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 HECTD2Q5U5R9 776 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 GPR152Q8TDT2 470 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 SLITRK2Q9H156 845 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 CLEC4MQ9H2X3 399 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 TMPRSS4Q9NRS4 437 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 RFXANKO14593 260 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 MC4RP32245 332 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 EML3Q32P44 896 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 MZT2AQ6P582 158 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 ZYG11AQ6WRX3 759 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 ZFP28Q8NHY6 868 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 GBA3Q9H227 469 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 MUC13Q9H3R2 512 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 VPS4AQ9UN37 437 aa16.14■□□□□ 0.17
HMGXB3-202ENST00000503427 MTX3Q5HYI7 312 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 MZT2BQ6NZ67 158 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ZC3H7AQ8IWR0 971 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 PIK3R5Q8WYR1 880 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 TFAP2BQ92481 460 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 CLPTM1LQ96KA5 538 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 NOL11Q9H8H0 719 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 LRP6O75581 1613 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 GNRH1P01148 92 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 L1CAMP32004 1257 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 PFKPQ01813 784 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 FUT10Q6P4F1 479 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 RD3Q7Z3Z2 195 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 OR2T12Q8NG77 320 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 PHF10Q8WUB8 498 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ERGIC3Q9Y282 383 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 SCAMP3O14828 347 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 PLIN3O60664 434 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ETS2P15036 469 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF37AP17032 561 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 TNNI3P19429 210 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 SPIDRQ14159 915 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 CPSF6Q16630 551 aaKnown RBP eCLIP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 DOK6Q6PKX4 331 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 GATAD2AQ86YP4 633 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 CPSF7Q8N684 471 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF513Q8N8E2 541 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 GORASP1Q9BQQ3 440 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 FADS3Q9Y5Q0 445 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF536O15090 1300 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ADAMTS3O15072 1205 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 MSI1O43347 362 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 CBFA2T3O75081 653 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 TIPRLO75663 272 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 XKR6Q5GH73 641 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 ANKS1BQ7Z6G8 1248 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 OR2T3Q8NH03 318 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 KLHL5Q96PQ7 755 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC9A7Q96T83 725 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 FAIM2Q9BWQ8 316 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 PCDH12Q9NPG4 1184 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 CHRAC1Q9NRG0 131 aa16.13■□□□□ 0.17
HMGXB3-202ENST00000503427 FOXO6A8MYZ6 492 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 RPP40O75818 363 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 OR4Q2P0C623 313 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 JAK1P23458 1154 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 CSNK2BP67870 215 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 PTSQ03393 145 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 FAM46CQ5VWP2 391 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 DET1Q7L5Y6 550 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 IFNL1Q8IU54 200 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC47A1Q96FL8 570 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 PCED1BQ96HM7 432 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 C12orf65Q9H3J6 166 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 TBC1D14Q9P2M4 693 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 ZNF232Q9UNY5 417 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 MSX2P35548 267 aaPredicted RBP16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 SLC35G1Q2M3R5 365 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 BHLHB9Q6PI77 547 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 PAGE2Q7Z2X7 111 aa16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 R3HCC1LQ7Z5L2 792 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-202ENST00000503427 NXNL1Q96CM4 212 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms