RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TTC14Q96N46 770 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SERINC2Q96SA4 455 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM110AQ9BQ89 295 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM47Q9BQJ4 181 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RSPH9Q9H1X1 276 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CCDC68Q9H2F9 335 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 NDST4Q9H3R1 872 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SMARCAD1Q9H4L7 1026 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC28A3Q9HAS3 691 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RANGRFQ9HD47 186 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 MKKSQ9NPJ1 570 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPR108Q9NPR9 543 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 IL36RNQ9UBH0 155 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 ADD3Q9UEY8 706 aaKnown RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RCOR1Q9UKL0 485 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 FZD10Q9ULW2 581 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 ERVK-11Q9UQG0 969 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 MTMR6Q9Y217 621 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 PAM16Q9Y3D7 125 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 TTLL3Q9Y4R7 772 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 KAT6BQ8WYB5 2073 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A087WYN8 130 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A1B0GVM2 712 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 OR6C75A6NL08 312 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 AKR1B15C9JRZ8 316 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 TIMM23O14925 209 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NDUFS3O75489 264 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 SOX30O94993 753 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 OR2C1O95371 312 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 VNN2O95498 520 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 RPN1P04843 607 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CYC1P08574 325 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CLTBP09497 229 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 G6PDP11413 515 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CD58P19256 250 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 RRM1P23921 792 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPTP24298 496 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 MCM3P25205 808 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARRB2P32121 409 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 RPL3P39023 403 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 EIF2S3P41091 472 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 UBA7P41226 1012 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 GARSP41250 739 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 PIK3CAP42336 1068 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 COMPP49747 757 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CLCN3P51790 818 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NUDT6P53370 316 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 GALCP54803 685 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CDH8P55286 799 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NLRP5P59047 1200 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ROR2Q01974 943 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NFATC4Q14934 902 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 WTAPQ15007 396 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NAB2Q15742 525 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZSCAN23Q3MJ62 389 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 DUSP28Q4G0W2 176 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 TYW3Q6IPR3 259 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ANKRD54Q6NXT1 300 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 B3GNT6Q6ZMB0 384 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 GLDNQ6ZMI3 551 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 MTSS1LQ765P7 747 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 BRINP3Q76B58 766 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 SHFQ7M4L6 423 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 TICAM1Q8IUC6 712 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 RPAP2Q8IXW5 612 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 TEX11Q8IYF3 940 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ADGRF2Q8IZF7 708 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 FBXL14Q8N1E6 418 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 C17orf53Q8N3J3 647 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 SRBD1Q8N5C6 995 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 AADATQ8N5Z0 425 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 ASB5Q8WWX0 329 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 WBP2Q969T9 261 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NSUN4Q96CB9 384 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM120BQ96EK7 910 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 MED30Q96HR3 178 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 RSRC1Q96IZ7 334 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 HARBI1Q96MB7 349 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NCAPGQ9BPX3 1015 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NUDT16L1Q9BRJ7 211 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 IFIH1Q9BYX4 1025 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 PDZD7Q9H5P4 517 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 HINT3Q9NQE9 182 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 HIF1ANQ9NWT6 349 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 NSMCE4AQ9NXX6 385 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 CDC14AQ9UNH5 594 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 R3HDM2Q9Y2K5 976 aaKnown RBP2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC45A1Q9Y2W3 748 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 SESN1Q9Y6P5 492 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 STON1Q9Y6Q2 735 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 MAU2Q9Y6X3 613 aa2.47□□□□□ -2.01
HMGB1P35-201ENST00000503360 IGHV4-28A0A0C4DH34 117 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 hCG_1807616A0A1W2PRN6 198 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 FAM170AA1A519 330 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 C1orf226A1L170 272 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 AGAP14A8MT82 685 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 A8MZ25 164 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 VCYO14598 125 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 SCAMP1O15126 338 aa2.46□□□□□ -2.02
HMGB1P35-201ENST00000503360 HSPA12AO43301 675 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms