RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 B4DGG1 531 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 H3BRJ5 948 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 DFFAO00273 331 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PPM1DO15297 605 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SOD1P00441 154 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CPP00450 1065 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 TRBC1P01850 177 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC2A4P14672 509 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 TNFAIP3P21580 790 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 LHCGRP22888 699 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CSTF2P33240 577 aaKnown RBP eCLIP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ADCY8P40145 1251 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 MMP13P45452 471 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 OR1D5P58170 312 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CTBSQ01459 385 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 MC2RQ01718 297 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 MC1RQ01726 317 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SRSF1Q07955 248 aaKnown RBP eCLIP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 NFATC3Q12968 1075 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF235Q14590 738 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 STX1AQ16623 288 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PYCR3Q53H96 274 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 DCAF12Q5T6F0 453 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PHF19Q5T6S3 580 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ARMC12Q5T9G4 340 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 MARC1Q5VT66 337 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 TIGD7Q6NT04 549 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 TMCO3Q6UWJ1 677 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CEACAM20Q6UY09 585 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 NYAP1Q6ZVC0 841 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PELI3Q8N2H9 469 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PGBD5Q8N414 524 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SFRP1Q8N474 314 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 Q8N9G6 341 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 NETO2Q8NC67 525 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 EXD1Q8NHP7 514 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF564Q8TBZ8 553 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 NSMCE1Q8WV22 266 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 HTR3CQ8WXA8 447 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 MAML1Q92585 1016 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SYN2Q92777 582 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 EXTL1Q92935 676 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CELF6Q96J87 481 aaKnown RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 CCDC74BQ96LY2 380 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 TSGA13Q96PP4 275 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PEBP4Q96S96 227 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 XPO4Q9C0E2 1151 aaKnown RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 POLR1EQ9GZS1 481 aaKnown RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SYNDIG1Q9H7V2 258 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 RDH14Q9HBH5 336 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 RTN4Q9NQC3 1192 aaKnown RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 NFKBIL1Q9UBC1 381 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 LCMT1Q9UIC8 334 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PILRAQ9UKJ1 303 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 SUFUQ9UMX1 484 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDHGC4Q9Y5F7 938 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 ST14Q9Y5Y6 855 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 BZW2Q9Y6E2 419 aaKnown RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 BOD1L1Q8NFC6 3051 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 MN1Q10571 1320 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 KIR2DS5A0A0G2JLQ3 304 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 A0A0G2JNG1 304 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 A6NCN8 305 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NPIPB15A6NHN6 443 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF891A8MT65 544 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 KIR2DS3K7RE56 304 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 TEX33O43247 280 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 DUX1O43812 170 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 DNAJC6O75061 913 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 FTLP02792 175 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NTRK1P04629 796 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CCL4P13236 92 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 XRCC1P18887 633 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 WT1P19544 449 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CDK11BP21127 795 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CA4P22748 312 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 IL4RP24394 825 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CCNCP24863 283 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ALDH4A1P30038 563 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ETV3P41162 512 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CASRP41180 1078 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 GPR1P46091 355 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CCR10P46092 362 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 MAPK10P53779 464 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PTSQ03393 145 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 TRAF2Q12933 501 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 KIR2DS5Q14953 304 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PAFAH1B3Q15102 231 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC14A2Q15849 920 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PPP6R3Q5H9R7 873 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PDPK2PQ6A1A2 396 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 RAET1GQ6H3X3 334 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 SASS6Q6UVJ0 657 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 Q6ZVL8 140 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PRICKLE2Q7Z3G6 844 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms