RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DNAJB4Q9UDY4 337 aa5.36□□□□□ -1.55
HMGB1P3-201ENST00000502802 GTF3C4Q9UKN8 822 aa5.36□□□□□ -1.55
HMGB1P3-201ENST00000502802 FLT1P17948 1338 aa5.36□□□□□ -1.55
HMGB1P3-201ENST00000502802 TOP2AP11388 1531 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 A0A0U1RQG5 324 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 MANSC4A6NHS7 340 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 PLRG1O43660 514 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 FZD7O75084 574 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CHRNB2P17787 502 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 GPTP24298 496 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CERS1P27544 350 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 TNNT3P45378 269 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 MMP14P50281 582 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ARSEP51690 589 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CSE1LP55060 971 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ELLP55199 621 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 PROK1P58294 105 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 RBP5P82980 135 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 BFSP1Q12934 665 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 GGNBP1Q5YKI7 109 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ANKRD54Q6NXT1 300 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 METTL2BQ6P1Q9 378 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 DCLRE1AQ6PJP8 1040 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 PTF1AQ7RTS3 328 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CACNA2D4Q7Z3S7 1137 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 PATL1Q86TB9 770 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 SPATA6LQ8N4H0 392 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 TC2NQ8N9U0 490 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 BOLLQ8N9W6 283 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 TMEM163Q8TC26 289 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 LPGAT1Q92604 370 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ERGIC1Q969X5 290 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 SIPA1Q96FS4 1042 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 METTL2AQ96IZ6 378 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 JAKMIP1Q96N16 626 aaKnown RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 GBP5Q96PP8 586 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CDRT15Q96T59 188 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 RTN4RQ9BZR6 473 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 MMP27Q9H306 513 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ST6GALNAC4Q9H4F1 302 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 EPB41L5Q9HCM4 733 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 PFDN4Q9NQP4 134 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 TMEM184CQ9NVA4 438 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 MSRB1Q9NZV6 116 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CRNNQ9UBG3 495 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 UBA2Q9UBT2 640 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 ZNF148Q9UQR1 794 aa5.35□□□□□ -1.55
HMGB1P3-201ENST00000502802 CFTRP13569 1480 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 FANCD2Q9BXW9 1451 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 CEP164Q9UPV0 1460 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 A0A1W2PPC1 479 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 KANSL1LA0AUZ9 987 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 GAGE12JA6NER3 117 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 PPP6CO00743 305 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MDM4O15151 490 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 BCAR3O75815 825 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 C22orf31O95567 290 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 BCL10O95999 233 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 ICAM1P05362 532 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 CYC1P08574 325 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 DDX5P17844 614 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MAOAP21397 527 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 UBA1P22314 1058 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MCCP23508 829 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 BUD31P41223 144 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MATR3P43243 847 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 RAD23BP54727 409 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 SREBF2Q12772 1141 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 GRIK2Q13002 908 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 LAMB3Q13751 1172 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 DUSP6Q16828 381 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 LETM2Q2VYF4 491 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MMEL1Q495T6 779 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 ZNF805Q5CZA5 627 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 DHRS7BQ6IAN0 325 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 CAMKMTQ7Z624 323 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 SDCCAG8Q86SQ7 713 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 Q8N1X5 172 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 XXYLT1Q8NBI6 393 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 TSPAN14Q8NG11 270 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 GPT2Q8TD30 523 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 TMEM174Q8WUU8 243 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 FER1L6-AS2Q96M78 137 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 GFM1Q96RP9 751 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 NAA11Q9BSU3 229 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 PIGMQ9H3S5 423 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 ESRP2Q9H6T0 727 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 MAGIXQ9H6Y5 334 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 ABCF3Q9NUQ8 709 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 OR14J1Q9UGF5 321 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 TUBE1Q9UJT0 475 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 WBP11Q9Y2W2 641 aaKnown RBP5.34□□□□□ -1.55
HMGB1P3-201ENST00000502802 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
HMGB1P3-201ENST00000502802 MAGEB17A8MXT2 336 aa5.33□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNF814B7Z6K7 855 aa5.33□□□□□ -1.56
HMGB1P3-201ENST00000502802 H0Y626 953 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms