RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 FBXO27Q8NI29 283 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 MAML1Q92585 1016 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 ALG3Q92685 438 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 BHMTQ93088 406 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 IGSF8Q969P0 613 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PCED1BQ96HM7 432 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 TMEM176AQ96HP8 235 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 NSL1Q96IY1 281 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 RUNDC3BQ96NL0 473 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PANX3Q96QZ0 392 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PKMYT1Q99640 499 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 REEP2Q9BRK0 252 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 FAM213AQ9BRX8 229 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 HGH1Q9BTY7 390 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 MKRN2Q9H000 416 aaKnown RBP4.54□□□□□ -1.68
MATR3-202ENST00000502422 NDE1Q9NXR1 346 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PCYOX1Q9UHG3 505 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 FOXD3Q9UJU5 478 aaPredicted RBP4.54□□□□□ -1.68
MATR3-202ENST00000502422 LSM7Q9UK45 103 aaKnown RBP4.54□□□□□ -1.68
MATR3-202ENST00000502422 ITGA11Q9UKX5 1188 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PCDHGB4Q9UN71 923 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 PLA2G4CQ9UP65 541 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 NAALADL1Q9UQQ1 740 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 DMTF1Q9Y222 760 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 HBS1LQ9Y450 684 aaKnown RBP4.54□□□□□ -1.68
MATR3-202ENST00000502422 PCDHGB5Q9Y5G0 923 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 NOX1Q9Y5S8 564 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 CEPT1Q9Y6K0 416 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 STON1Q9Y6Q2 735 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 KNL1Q8NG31 2342 aa4.54□□□□□ -1.68
MATR3-202ENST00000502422 C15orf38-AP3S2A0A0A6YYH1 394 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 CCDC162PA2VCL2 907 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 FAM47DPA6NHR8 397 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 TERTO14746 1132 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 NPC1O15118 1278 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 EFSO43281 561 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 COCHO43405 550 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 SLC26A4O43511 780 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 BNIP3LO60238 219 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 PCDHGA12O60330 932 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 DFNA5O60443 496 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ACSL3O95573 720 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ITGAVP06756 1048 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 C1SP09871 688 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 C6P13671 934 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 CTNNA2P26232 953 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 PPP1R2P41236 205 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 STT3AP46977 705 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 GRIA4P48058 902 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ENTPD1P49961 510 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 AQP4P55087 323 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 UCNP55089 124 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 TMPRSS3P57727 454 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 RPL26P61254 145 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 BNC1Q01954 994 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 TLE3Q04726 772 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 TNP2Q05952 138 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 MED21Q13503 144 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 LY6DQ14210 128 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 RTP5Q14D33 572 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ASIC2Q16515 512 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 SOWAHAQ2M3V2 549 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 TMEM95Q3KNT9 176 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 CCDC153Q494R4 210 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 INO80DQ53TQ3 878 aaPredicted RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 ARSHQ5FYA8 562 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 HES3Q5TGS1 186 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ALKBH5Q6P6C2 394 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 RFX8Q6ZV50 586 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 NET1Q7Z628 596 aaPredicted RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 ARPINQ7Z6K5 226 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 PRUNE1Q86TP1 453 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 GPBP1Q86WP2 473 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 SPACA3Q8IXA5 215 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 SRRM1Q8IYB3 904 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 SLC7A5P1Q8MH63 180 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ZNF276Q8N554 614 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.53□□□□□ -1.68
MATR3-202ENST00000502422 ZNF248Q8NDW4 579 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 OR6B3Q8NGW1 331 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ZNF398Q8TD17 642 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 GIPC3Q8TF64 312 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 FAM172AQ8WUF8 416 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 GFM2Q969S9 779 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 CALML4Q96GE6 196 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 ANKRD36BP1Q96IX9 119 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 CNDP2Q96KP4 475 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 ELOVL4Q9GZR5 314 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 KCNK13Q9HB14 408 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 OSGEPQ9NPF4 335 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 NDFIP2Q9NV92 336 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 NKIRAS1Q9NYS0 192 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 RBAKQ9NYW8 714 aaPredicted RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 SELENONQ9NZV5 590 aa4.53□□□□□ -1.68
MATR3-202ENST00000502422 USP36Q9P275 1121 aaKnown RBP4.53□□□□□ -1.68
MATR3-202ENST00000502422 VTI1BQ9UEU0 232 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms