RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 MYCLP1P12525 358 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-210ENST00000498739 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
PRKCB-210ENST00000498739 KELP23276 732 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 HNRNPKP61978 463 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■■■■ 31.3
PRKCB-210ENST00000498739 ALS2CLQ60I27 953 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 TTC27Q6P3X3 843 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 NLRP8Q86W28 1048 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 PHACTR4Q8IZ21 702 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 TTC30BQ8N4P2 665 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 GPR26Q8NDV2 337 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 CAMK1GQ96NX5 476 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 TEX101Q9BY14 249 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 SLC32A1Q9H598 525 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 BPIFA1Q9NP55 256 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 RAD18Q9NS91 495 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 KLQ9UEF7 1012 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 KLF15Q9UIH9 416 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 PNMA8BQ9ULN7 279 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-210ENST00000498739 PTPRZ1P23471 2315 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 WDR87Q6ZQQ6 2873 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 TMEM202A6NGA9 273 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 FANCGO15287 622 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 BUD23O43709 281 aaKnown RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 PHF2O75151 1096 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 SOD1P00441 154 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 PYGLP06737 847 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 HOXC4P09017 264 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 JUNDP17535 347 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 CSRP1P21291 193 aaKnown RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 TEAD1P28347 426 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 HMGCLP35914 325 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 COILP38432 576 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 GRK6P43250 576 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 CDK3Q00526 305 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 PPARDQ03181 441 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 TRIP13Q15645 432 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 INAVAQ3KP66 663 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 HENMT1Q5T8I9 393 aaKnown RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 DENND5AQ6IQ26 1287 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 CCDC137Q6PK04 289 aaKnown RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 DBX2Q6ZNG2 339 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 NYAP1Q6ZVC0 841 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 RD3Q7Z3Z2 195 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 PIP4P1Q86T03 277 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 HID1Q8IV36 788 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 RBFAQ8N0V3 343 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 RHBDD1Q8TEB9 315 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 BTN2A2Q8WVV5 523 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 TSACCQ96A04 125 aaPredicted RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 SPATA16Q9BXB7 569 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
PRKCB-210ENST00000498739 MOSPD1Q9UJG1 213 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 BTBD3Q9Y2F9 522 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 CACNA1EQ15878 2313 aa16.69■□□□□ 0.26
PRKCB-210ENST00000498739 LAMA1P25391 3075 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 ERI2A8K979 691 aaKnown RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 INPP4BO15327 924 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 RASGRP1O95267 797 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 BPIP17213 487 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 DGKAP23743 735 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 CASQ1P31415 396 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 BLKP51451 505 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 NOVA1P51513 510 aaKnown RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 DCDC1P59894 354 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 SRP54P61011 504 aaKnown RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 BASP1P80723 227 aaKnown RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 SEMA5AQ13591 1074 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 ALG11Q2TAA5 492 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 ADAMTSL4Q6UY14 1074 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 C4orf22Q6V702 233 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 LINC00523Q86TU6 105 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 PDXPQ96GD0 296 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 SLC13A1Q9BZW2 595 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 CDH19Q9H159 772 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 TCEAL2Q9H3H9 227 aaPredicted RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 ARNT2Q9HBZ2 717 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 FGF22Q9HCT0 170 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 PIH1D1Q9NWS0 290 aaKnown RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 UCKL1Q9NWZ5 548 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 FEZ2Q9UHY8 353 aaPredicted RBP16.68■□□□□ 0.26
PRKCB-210ENST00000498739 PCOLCE2Q9UKZ9 415 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 PKP3Q9Y446 797 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 ARL5AQ9Y689 179 aa16.68■□□□□ 0.26
PRKCB-210ENST00000498739 C2orf81A6NN90 581 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 FADS2P1A8MWK0 482 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 SCAMP1O15126 338 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 STX7O15400 261 aaKnown RBP16.67■□□□□ 0.26
PRKCB-210ENST00000498739 KCNK5O95279 499 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 TNFP01375 233 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 KRT14P02533 472 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 APRTP07741 180 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 VPS41P49754 854 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 HK3P52790 923 aa16.67■□□□□ 0.26
PRKCB-210ENST00000498739 ETF1P62495 437 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms