RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 DUSP3P51452 185 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 GEMP55040 296 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 CDK3Q00526 305 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 KLF1Q13351 362 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 DEFB133Q30KQ1 61 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 ZCCHC8Q6NZY4 707 aaKnown RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 KDELC1Q6UW63 502 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 NYAP1Q6ZVC0 841 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 LYSMD3Q7Z3D4 306 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 TMC3Q7Z5M5 1100 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 GKN2Q86XP6 184 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 SDR16C5Q8N3Y7 309 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 SLC25A41Q8N5S1 370 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 FAM181AQ8N9Y4 354 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 IPMKQ8NFU5 416 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 TRIM58Q8NG06 486 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 MRGPRX2Q96LB1 330 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 AGAP2Q99490 1192 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 LRRC61Q9BV99 259 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 RIOK2Q9BVS4 552 aaKnown RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 CLPBQ9H078 707 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 CYP4F12Q9HCS2 524 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 MRPL40Q9NQ50 206 aaKnown RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 WASF3Q9UPY6 502 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 AAR2Q9Y312 384 aaKnown RBP12.76□□□□□ -0.37
HSPG2-213ENST00000498495 DGKBQ9Y6T7 804 aa12.76□□□□□ -0.37
HSPG2-213ENST00000498495 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 CKMT1AP12532 417 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 ACADVLP49748 655 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 E2F1Q01094 437 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 ILKQ13418 452 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 TCEA2Q15560 299 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 DHRS13Q6UX07 377 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 GALNT15Q8N3T1 639 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 GLMNQ92990 594 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 OXNAD1Q96HP4 312 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-213ENST00000498495 HIC2Q96JB3 615 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 SPATA13Q96N96 652 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 FSD1LQ9BXM9 530 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 GBA3Q9H227 469 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 RAD18Q9NS91 495 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 NCKIPSDQ9NZQ3 722 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 KLK13Q9UKR3 277 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 NEUROG3Q9Y4Z2 214 aa12.75□□□□□ -0.37
HSPG2-213ENST00000498495 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TCRBV7S2A1N4TA0A589 114 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 PRSS38A1L453 326 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 INPP4BO15327 924 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 ASMTLO95671 621 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 SLC4A1P02730 911 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CEACAM5P06731 702 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CELA2BP08218 269 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 MYF5P13349 255 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 HLA-DPA1P20036 260 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 POLD2P49005 469 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 RPIAP49247 311 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 SLC1A5Q15758 541 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 SIRPB2Q5JXA9 342 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 ADAMTSL4Q6UY14 1074 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TAF8Q7Z7C8 310 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 SLC13A5Q86YT5 568 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 EID2BQ96D98 161 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 PDXPQ96GD0 296 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 FRMD8Q9BZ67 464 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TMEM168Q9H0V1 697 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CDH19Q9H159 772 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CARD9Q9H257 536 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TRABDQ9H4I3 376 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 SUDS3Q9H7L9 328 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CARS2Q9HA77 564 aaKnown RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 HACD3Q9P035 362 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 GULP1Q9UBP9 304 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 R3HDM2Q9Y2K5 976 aaKnown RBP12.74□□□□□ -0.37
HSPG2-213ENST00000498495 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 MSRB2Q9Y3D2 182 aa12.74□□□□□ -0.37
HSPG2-213ENST00000498495 CPED1A4D0V7 1026 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 AURKAO14965 403 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SOD1P00441 154 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 AGTP01019 485 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 FGF1P05230 155 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 JUPP14923 745 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 PSMB4P28070 264 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
HSPG2-213ENST00000498495 CHRNA4P43681 627 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 GNPDA1P46926 289 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 NR0B2Q15466 257 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 C6orf132Q5T0Z8 1188 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms